Pairwise Alignments
Query, 923 a.a., putative Antibiotic biosynthesis protein from Pseudomonas putida KT2440
Subject, 6131 a.a., Polyketide synthase modules and related proteins from Variovorax sp. SCN45
Score = 278 bits (711), Expect = 8e-78
Identities = 190/558 (34%), Positives = 272/558 (48%), Gaps = 12/558 (2%)
Query: 12 LEYRA-EQPIHHAFIQQASRCPAAIAIIGQHATCSYSQLEQISAGIAAFLVKNAASGTDR 70
L +RA E P+H QQA R P A+A++ + SY+QLE + +A L+ +
Sbjct: 3082 LPHRAHEAPVHRLIGQQARRTPEAVALVFGDVSLSYAQLEARANRLAHRLIALGVRPDTK 3141
Query: 71 VVIVSRRSAALVYAMLGCLRAGLAFTVADAAYPAARIEQIVNTLKPAVILRCAEASVDVG 130
V I + RS +V +L L+AG A+ D YP RI ++ +++L + + +
Sbjct: 3142 VGIATERSLEMVVGLLAILKAGGAYVPIDPEYPPERIAYMLEDSGVSLLLTQSHIAPAIP 3201
Query: 131 QPMVVTVPEALAEALQAFPRQPVALPAVSPEQPAYITFTSGSTGEPKGIVTHHAPLVHFI 190
V E L + P +P + E AY+ +TSGSTG PKG H L + +
Sbjct: 3202 ARQGVQTIELDLLDLDSGPSVDPDVP-LHGEHLAYVIYTSGSTGRPKGAANRHLSLFNRL 3260
Query: 191 DWHVRQHGFTQADTFSLLSGLGHDPVYRDVFTPLSLGATIACPAQSTLTEPSRLASWLHQ 250
W + +ADT + D + F PL GA + EP +L + +
Sbjct: 3261 AWMQDAYALNEADTVLQKTPFSFDVSVWEFFWPLMQGARLVVAQPGDHREPGKLVELIRR 3320
Query: 251 HGVSVIHLTPPLGKLIETGAHLNGQILDHLRYLFWGGDALSPTQYQQVRAIAPNAVNVNF 310
HGVS IH P + L AH + L+ + G+AL +V P A N
Sbjct: 3321 HGVSTIHFVPSM--LQAFVAHEGIEACTSLKRIVCSGEALPAEAQARVFERLPGAGLYNL 3378
Query: 311 YGTTETPQAMAFHTLDPEMDNARVPLGKGIADAQLLVINPANQLVSEGETGEILIRSPYL 370
YG TE + + + N V +G+ IA + V++ L ++G GE+ + L
Sbjct: 3379 YGPTEAAIDVTHWSCRADGRN-HVAIGRPIAGTKTYVLDDGLNLAAQGLAGELYLGGIGL 3437
Query: 371 SRGYWDDPGLTEAKFIANPFTADTADRCYRTGDLGTYLADGSARFLGRADSQVKIRGHRI 430
+RGY D LT +F+A+PF+ D +R YRTGDL + DG +LGR D QVKIRG RI
Sbjct: 3438 ARGYLDKSALTSERFVADPFS-DAGERLYRTGDLVRWREDGELEYLGRIDHQVKIRGFRI 3496
Query: 431 ELAEIENAICRHPHIGQCVVLTNHEGASTRLVAY---CVAQQAIRADELRQALSGQLPDY 487
EL EIE + P + + VV+ RLVAY A QAI A +L+Q LS LP++
Sbjct: 3497 ELGEIEARLLAQPGVREAVVVAQQAAGGARLVAYVSAAAASQAIDAAQLKQQLSRALPEH 3556
Query: 488 MVPALFVFLDALPLTPNAKVDKRALP---AAFDDSINPPLSPLAEKLSTAWARILQVPRL 544
MVP + V L ALPL N KVD++ALP A D+ P L+ WA +L V R+
Sbjct: 3557 MVPGVIVVLQALPLNANGKVDRKALPPPERAGTDAYEAPADDTERALAAIWADVLAVERV 3616
Query: 545 DARLSFVELGGDSLSFVQ 562
+F ELGG SL +Q
Sbjct: 3617 GRNDNFFELGGHSLLAIQ 3634
Score = 254 bits (650), Expect = 9e-71
Identities = 192/592 (32%), Positives = 287/592 (48%), Gaps = 20/592 (3%)
Query: 18 QPIHHAFIQQASRCPAAIAIIGQHATCSYSQLEQISAGIAAFLVKNAASGTDRVVIVSRR 77
+P+H +QA P A A+I SY+ L + +A LV RV + +R
Sbjct: 1590 EPVHRLVERQAGLRPDATALIFGEEQLSYAGLNVRANRLAHRLVAMGVKPETRVGLAVKR 1649
Query: 78 SAALVYAMLGCLRAGLAFTVADAAYPAARIEQIVNTLKPAVILRCAEASVDVGQPMVVTV 137
S +V A+L L++G A+ D YP R+ +V A++L +EA + P + +
Sbjct: 1650 SPDMVVALLAILKSGGAYVPLDPTYPPDRLAYMVQDSGIALLLTNSEAGERIAAPCRLDL 1709
Query: 138 PEALAEALQAFPRQPVALPAVSPEQPAYITFTSGSTGEPKGIVTHHAPLVHFIDWHVRQH 197
+ L A P A+P V AY+ +TSGSTG+PKG+ H PL + +
Sbjct: 1710 DKV---DLDAQPSHNPAVP-VHGANLAYVIYTSGSTGKPKGVAVAHGPLSMHVQSIGEAY 1765
Query: 198 GFTQADTFSLLSGLGHDPVYRDVFTPLSLGATIACPAQSTLTEPSRLASWLHQHGVSVIH 257
G T D + + D + + PL+ G+ + P + R + + +HG+++
Sbjct: 1766 GMTPEDRELQFASISFDGAHERTWVPLAFGSALM-PRDEEVWSVERTCAEIERHGITIAC 1824
Query: 258 LTPPLGKLIETGAHLNGQILDHL--RYLFWGGDALSPTQYQQVRAIAPNAVNVNFYGTTE 315
TP G L + A L G+ L R GG+A+ T + V+ + +N YG TE
Sbjct: 1825 FTP--GYLHQI-AELMGESASRLPIRSYTVGGEAMPRTSLELVQKVLRPRRVINGYGPTE 1881
Query: 316 TPQAMAFHTLDPEM--DNARVPLGKGIADAQLLVINPANQLVSEGETGEILIRSPYLSRG 373
T + + D+A +P+G+ I D V++ LV G GE+ + L+RG
Sbjct: 1882 TVITPMIAKAEDGIGFDSAYMPIGRLIGDRTAYVLDAGLSLVPPGVAGELYLGGEGLARG 1941
Query: 374 YWDDPGLTEAKFIANPFTADTADRCYRTGDLGTYLADGSARFLGRADSQVKIRGHRIELA 433
Y + GL+ +F+A+PF D R YRTGDL + ADG +LGR D QVKIRG RIEL
Sbjct: 1942 YLNRAGLSAERFVADPFD-DRGGRLYRTGDLVRWGADGQMEYLGRIDHQVKIRGFRIELG 2000
Query: 434 EIENAICRHPHIGQCVVLTNHEGASTRLVAYCVA--QQAIRADELRQALSGQLPDYMVPA 491
E+E + P + + VV+ + RLV Y A I LR+ L LPDYMVPA
Sbjct: 2001 EVEAQLLAQPEVQEAVVVARRGASGARLVGYVSALPGAVIDGQALRERLGQVLPDYMVPA 2060
Query: 492 LFVFLDALPLTPNAKVDKRALPA---AFDDSINPPLSPLAEKLSTAWARILQVPRLDARL 548
V LDALPL KVD+ LP A + + + L+ WA +L V ++
Sbjct: 2061 ALVVLDALPLNGAGKVDRATLPEPVFAGAGAHEAARGEVEQMLAAVWASVLGVEQVGRTD 2120
Query: 549 SFVELGGDSLSFVQ-ASRVLEALIGHLPER-WETLPVCQLAELSAPPKGAWR 598
+F ELGGDS+ +Q +RV +A P + +E V QLA ++ P + A R
Sbjct: 2121 NFFELGGDSILSLQIVARVRQAGWKLTPRQLFERQTVAQLAAVAQPVETAGR 2172
Score = 242 bits (617), Expect = 6e-67
Identities = 170/555 (30%), Positives = 267/555 (48%), Gaps = 29/555 (5%)
Query: 18 QPIHHAFIQQASRCPAAIAIIGQHATCSYSQLEQISAGIAAFLVKNAASGTDRVVIVSRR 77
+P+H QQ P AIA++ +Y+QL + + +A L+ + + +V I R
Sbjct: 4179 KPVHRLIEQQVRARPDAIALVCGAQALTYAQLNERANRLAHRLIASGVTSESKVGIAVSR 4238
Query: 78 SAALVYAMLGCLRAGLAFTVADAAYPAARIEQIVNTLKPAVILRCAEASVDVGQPMVVTV 137
+A +V +L L++G A+ D YP R+ +V +++L + ++ +
Sbjct: 4239 NADMVAGVLAVLKSGAAYVPLDPEYPQDRLAYMVEDSGLSLLLMQSH--------LLERL 4290
Query: 138 PEALAEALQAFPRQPVALPAVSPEQP------AYITFTSGSTGEPKGIVTHHAPLVHFID 191
P+ AL PA PE P AY+ +TSGSTG+PKG++ H L HFI
Sbjct: 4291 PDVPMLALDRLDLS--GEPAHDPEVPLHAEHLAYVIYTSGSTGKPKGVMVRHEALSHFIR 4348
Query: 192 WHVRQHGFTQADTFSLLSGLGHDPVYRDVFTPLSLGATIACPAQSTLTEPSRLASWLHQH 251
G T D ++ L D +++ PLS GA I +Q T+ + LA + +
Sbjct: 4349 SMQAAPGMTAEDVLVAVTSLSFDIAALELYLPLSCGARIVLASQETVRDGRALAQLVEES 4408
Query: 252 GVSVIHLTPPLGKLIETGAHLNGQILDHLRYLFWGGDALSPTQYQQVRAIAPNAVNVNFY 311
G +++ TP +L+ + H GG+AL + + + N+ Y
Sbjct: 4409 GATLVQSTPAGWRLLRAAGWPAAPL--HGFKGLCGGEALQSDLAEDLHGLGVELWNM--Y 4464
Query: 312 GTTETPQAMAFHTLDPEMDNARVPLGKGIADAQLLVINPANQLVSEGETGEILIRSPYLS 371
G TET + + + +G+ IA QL V++ Q V +G GE+ I L+
Sbjct: 4465 GPTET----TIWSSAQRVADGHPGIGEAIAATQLRVLDADLQPVPQGVAGELYIGGVGLA 4520
Query: 372 RGYWDDPGLTEAKFIANPFTADTADRCYRTGDLGTYLADGSARFLGRADSQVKIRGHRIE 431
RGY PGL+ +F+A+PF +R YRTGD+ + DG ++L R D Q+KIRG RIE
Sbjct: 4521 RGYLHRPGLSAERFLADPF-GTKGERIYRTGDMVRWSFDGRLQYLSRVDHQIKIRGFRIE 4579
Query: 432 LAEIENAICRHPHIGQCVVLTNHEGASTRLVAYCVAQQAIRADELRQALSGQLPDYMVPA 491
L EIE + P + + VV+ RLVAY + L+ +S LP+YMVPA
Sbjct: 4580 LGEIETQLLAQPEVREAVVVAKEGPGGARLVAYVSLSSDTQPQLLKARISRALPEYMVPA 4639
Query: 492 LFVFLDALPLTPNAKVDKRALP---AAFDDSINPPLSPLAEKLSTAWARILQVPRLDARL 548
+ L ALPL N KVD++ LP + + + P + E L+ W ++L + R
Sbjct: 4640 SIMVLPALPLNMNGKVDRKQLPDPEPSAEAAHEAPQGAVEEALAAIWHQVLGAEKKIGRH 4699
Query: 549 -SFVELGGDSLSFVQ 562
+F ELGGDS+ +Q
Sbjct: 4700 DNFFELGGDSILSLQ 4714
Score = 236 bits (603), Expect = 3e-65
Identities = 186/571 (32%), Positives = 271/571 (47%), Gaps = 39/571 (6%)
Query: 12 LEYRAEQPIHHAFIQQASRC-PAAIAIIGQHATCSYSQLEQISAGIAAFLVKNAASGTDR 70
L+ +A++ + H I+ +R P AIA++ SY+QL + A L + G DR
Sbjct: 5231 LDAQADRTMVHRLIEAQARLRPDAIALLLGDDEMSYAQLNARANRFAHHL-RELGVGPDR 5289
Query: 71 VVIVS-RRSAALVYAMLGCLRAGLAFTVADAAYPAARIEQIVNTLKPAVILRCAEASVDV 129
+V V+ RS + +L L+AG A+ DAAYPA R+ ++ +L + SV
Sbjct: 5290 LVGVALERSLDTIVVLLAVLKAGGAYVPLDAAYPADRLAYMMRD--SGAMLLITQRSVLP 5347
Query: 130 GQPMVVTVPEALAEALQ----AFPRQPVALPAVSPEQPAYITFTSGSTGEPKGIVTHHAP 185
P TVP L + L P PA + AY+ +TSGSTG PKG+ H P
Sbjct: 5348 RLPET-TVPRLLLDELAPDALGAPSDADPSPATGVDNLAYVIYTSGSTGMPKGVAVTHGP 5406
Query: 186 LVHFIDWHVRQHGFTQADTFSLLS--------GLGHDPVYRDVFTPLSLGATIACPAQST 237
L H AD + L S D + TPL +GA +A
Sbjct: 5407 LA--------MHCLATADIYGLNSHSCELHFMSFSFDGAHERWLTPLCVGAGLALRDNEL 5458
Query: 238 LTEPSRLASWLHQHGVSVIHLTPPLGKLIETGAHLNGQILDHLRYLFWGGDALSPTQYQQ 297
T + LH++GV+ P I A Y+F GG+A+ Y +
Sbjct: 5459 WTAEQTYEA-LHRYGVTTAAFPPAYLNQIADWAAPRDDAPPVELYVF-GGEAMPKAAYDK 5516
Query: 298 VRAIAPNAVNVNFYGTTETPQAMAFHTLDPE--MDNARVPLGKGIADAQLLVINPANQLV 355
VR + +N YG TET + D A P+G+ + + V++ Q V
Sbjct: 5517 VRTHLKPRMLINGYGPTETVVTPLIWRTEASRTFDCAYAPIGRPVGERTAYVLDADMQPV 5576
Query: 356 SEGETGEILIRSPYLSRGYWDDPGLTEAKFIANPFTADTADRCYRTGDLGTYLADGSARF 415
EG GE+ I L+RGY LT +F+A+PF +R YRTGDL +++DG+ +
Sbjct: 5577 PEGVAGELYIGGYGLARGYLGRSALTAERFVADPF-GGAGERLYRTGDLVRWMSDGNVEY 5635
Query: 416 LGRADSQVKIRGHRIELAEIENAICRHPHIGQCVVLTNHEGASTRLVAYCVA----QQAI 471
LGR D+QVK+RG RIEL EIE + + + V+T+ A +LVAY VA Q
Sbjct: 5636 LGRVDNQVKVRGFRIELGEIEARLLAVTGVREAAVVTHDGAAGRQLVAYVVADGTEMQPQ 5695
Query: 472 RADELRQALSGQLPDYMVPALFVFLDALPLTPNAKVDKRALPAAFDDSIN----PPLSPL 527
++R+ L QLPDYMVPA L L + K+D+R+LP ++ PP +P
Sbjct: 5696 WPQQIREQLGAQLPDYMVPAHVAVLPKLSRLVSGKLDRRSLPVPEAENPGRVHVPPSTPQ 5755
Query: 528 AEKLSTAWARILQVPRLDARLSFVELGGDSL 558
AE+L+ W ++L V ++ +F ELGGDSL
Sbjct: 5756 AEQLAQIWQQVLGVGQVGETDNFFELGGDSL 5786
Score = 232 bits (591), Expect = 6e-64
Identities = 180/561 (32%), Positives = 266/561 (47%), Gaps = 24/561 (4%)
Query: 18 QPIHHAFIQQASRCPAAIAIIGQHATCSYSQLEQISAGIAAFLVKNAASGTDRVVIVSRR 77
+P+H QA P A+A++ + A+ SY +L + +A L+ RV + R
Sbjct: 502 RPLHAMIESQAQTRPDAVAVVYEDASLSYGELNARANRLAHRLIALGVKPETRVGLAVER 561
Query: 78 SAALVYAMLGCLRAGLAFTVADAAYPAARIEQIVNTLKPAVILRCAEAS--VDVGQPMVV 135
S +V +L L+AG A+ D YP R+ +V+ ++++ + V+V + + V
Sbjct: 562 SLDMVVGLLAILKAGGAYVPLDPQYPRDRLAYMVHDSAISLLVTQSGVRDCVEVREGLRV 621
Query: 136 TVPEALAEALQAFPRQPVALP--AVSPEQPAYITFTSGSTGEPKGIVTHHAPLVHFIDWH 193
+ L +P A P AV + AY+ +TSGSTG PKG H + +
Sbjct: 622 LELDTLD-----LRTEPTANPGVAVHADNLAYVIYTSGSTGRPKGAQLCHRNVARLLGAT 676
Query: 194 VRQHGFTQADTFSLLSGLGHDPVYRDVFTPLSLGATIACPAQSTLTEPSRLASWLHQHGV 253
F D +++ D ++F L G + P + L V
Sbjct: 677 EPWFRFGPDDVWTMFHSYAFDFSVWEIFGALCTGGRLVVVPYWVSRSPDDFMALLRSEKV 736
Query: 254 SVIHLTPP-LGKLIETGAHLNGQILDHLRYLFWGGDALSPTQYQQV--RAIAPNAVNVNF 310
+V++ TP G+LI A G+ L LR + +GG+AL P + R + VN
Sbjct: 737 TVLNQTPSAFGQLIHAPALDAGERLA-LRCVVFGGEALEPESLRPWIDRYGDSSPQLVNM 795
Query: 311 YGTTETPQAMAFHTL---DPEMDNARVPLGKGIADAQLLVINPANQLVSEGETGEILIRS 367
YG TET + + + D E D R P+G I D + V++ + G GE+ +
Sbjct: 796 YGITETTVHVTYRPITRADLE-DGKRSPVGIAIPDLGMHVLDGELNRLPVGVPGELYVAG 854
Query: 368 PYLSRGYWDDPGLTEAKFIANPFTADTADRCYRTGDLGTYLADGSARFLGRADSQVKIRG 427
L+RGY + GL+ +F+A+PF +R YRTGDL + DG +LGR D QVKIRG
Sbjct: 855 AGLARGYGNRAGLSAERFVADPF-GRAGERLYRTGDLVRWRNDGQLEYLGRIDHQVKIRG 913
Query: 428 HRIELAEIENAICRHPHIGQCVVLTNHEGASTRLVAYCVAQQAIRAD--ELRQALSGQLP 485
RIEL EIE + P + + +VL RLVAY Q + D L+ L LP
Sbjct: 914 FRIELGEIEGQLLAQPGVREAIVLAKDAPGGARLVAYVSPQAGRQLDVNTLKSGLGAVLP 973
Query: 486 DYMVPALFVFL-DALPLTPNAKVDKRALP---AAFDDSINPPLSPLAEKLSTAWARILQV 541
+YMVPA +V + LPL N KVD++ALP A D+ P E L+T WA +L V
Sbjct: 974 EYMVPAAWVAMPQGLPLNANGKVDRKALPEPERAGTDAYEAPQGTTEEALATLWAEVLGV 1033
Query: 542 PRLDARLSFVELGGDSLSFVQ 562
R+ SF ELGG SL +Q
Sbjct: 1034 ERVGRSDSFFELGGHSLLAIQ 1054