Pairwise Alignments

Query, 457 a.a., Major facilitator family transporter from Pseudomonas putida KT2440

Subject, 438 a.a., shikimate transporter (NCBI) from Escherichia coli BW25113

 Score =  227 bits (579), Expect = 5e-64
 Identities = 122/379 (32%), Positives = 206/379 (54%), Gaps = 6/379 (1%)

Query: 4   SSSQAKKATASGWIGSALEYYDFFIYAQAAALIFPQIFFPNTDPKMAIIASLATYGVGYL 63
           S S+A++A    + G+ +++YDF +Y   AAL+F + FFP   P M  +A+ AT+GVG+L
Sbjct: 16  SLSRARRAALGSFAGAVVDWYDFLLYGITAALVFNREFFPQVSPAMGTLAAFATFGVGFL 75

Query: 64  ARPIGAFVLGHWGDTRGRKNVLLLCMFLMGLSTMAVGLLPTYHDIGYLAPALLVVLRLIQ 123
            RP+G  + GH+GD  GRK +L+L +++MG++T  +G+LP++  IG+ AP LLV LR IQ
Sbjct: 76  FRPLGGVIFGHFGDRLGRKRMLMLTVWMMGIATALIGILPSFSTIGWWAPILLVTLRAIQ 135

Query: 124 GFAVAGEISGASSMIMEHAPFGRRGYYASFTLQGVQAGQVLAAAVFLPLAYFMPSEAFTE 183
           GFAV GE  GA+ + +E AP  ++ +Y+S    G   G +L+  +   ++     E F  
Sbjct: 136 GFAVGGEWGGAALLSVESAPKNKKAFYSSGVQVGYGVGLLLSTGLVSLISMMTTDEQFLS 195

Query: 184 WGWRIPFLMSAIVLIAGFIIRKEVHETPAFVQEEKQDKVAKS--PISEA-FRHSWKHMVL 240
           WGWRIPFL S ++++    +R  + E+  F Q++     AK   P+ EA  RH    + +
Sbjct: 196 WGWRIPFLFSIVLVLGALWVRNGMEESAEFEQQQHYQAAAKKRIPVIEALLRHPGAFLKI 255

Query: 241 VMFMALMNVIPVVATIFGAAYAVQPAYGIGFDKSVYLWIPVVGNIVAVLVIPFVGNLSDK 300
           +       +   + T F   Y+ Q    +G  + ++L I ++   ++ L IP    L+D+
Sbjct: 256 IALRLCELLTMYIVTAFALNYSTQ---NMGLPRELFLNIGLLVGGLSCLTIPCFAWLADR 312

Query: 301 IGRRPTMIAGCLGSGLLAFVYLYAISIQNVPMAFAASIVMWGMVYQGYNAVFPSFYPELF 360
            GRR   I G L   L AF +  A+  Q++      SI++  + +     V    + E+F
Sbjct: 313 FGRRRVYITGTLIGTLSAFPFFMALEAQSIFWIVFFSIMLANIAHDMVVCVQQPMFTEMF 372

Query: 361 HTRYRVTAMAIAQNIGTML 379
              YR +   +   + +++
Sbjct: 373 GASYRYSGAGVGYQVASVV 391