Pairwise Alignments

Query, 237 a.a., putative transcriptional regulatory protein from Pseudomonas putida KT2440

Subject, 235 a.a., DNA-binding regulatory protein, YebC/PmpR family from Echinicola vietnamensis KMM 6221, DSM 17526

 Score =  136 bits (343), Expect = 3e-37
 Identities = 84/218 (38%), Positives = 119/218 (54%), Gaps = 11/218 (5%)

Query: 19  KIMGKLSKEIQIAAK-SGADPDMNPRLRLAIVQAKKASMTRETLDRAIRKGAGLDGDAVQ 77
           K+  +L KEI  A K  G DPD NP+LR  +  AK A+M ++ ++ AI++ +  D     
Sbjct: 21  KVFTRLGKEIVTAVKLGGPDPDSNPKLRTVMQNAKGAAMPKDRIEAAIKRASNKDQS--N 78

Query: 78  YHAVSYEGFAPHQVPLIVECLTDNINRTVAQIRVLFRK--GQLGASGSVAWDFNHVGLIE 135
           Y  V YEG+APH V ++VE  TDNINRTVA +R  F K  G LG SGSV++ F+H  +  
Sbjct: 79  YEEVVYEGYAPHGVAILVEASTDNINRTVANVRHYFTKGGGSLGTSGSVSFMFDHKAVFR 138

Query: 136 ATPASADADP-EMAAIEAGAQDFEEGEEEGSTLFITDTTDLDAVQKALPEHGFTVTAAKI 194
                 D +  E+  I+ G +D +  E EG     T+  D   +QKAL +    VT+A  
Sbjct: 139 FPKGEHDMEELELELIDFGLEDID--ENEGEIFIYTEFEDFGNMQKALEDKNIEVTSADF 196

Query: 195 GYTPKNPVSAASLSAEALAEVEAFLEAIDEHDDVQNVY 232
               + P +   L+ E   EV   +E ++E DDV NVY
Sbjct: 197 ---QRFPTTTVELTEEQEEEVNKMIERMEEDDDVNNVY 231