Pairwise Alignments

Query, 470 a.a., gamma-aminobutyrate permease from Pseudomonas putida KT2440

Subject, 460 a.a., putative Gamma-aminobutyrate transporter from Pseudomonas putida KT2440

 Score =  300 bits (767), Expect = 9e-86
 Identities = 165/441 (37%), Positives = 262/441 (59%), Gaps = 9/441 (2%)

Query: 18  LSASLKSRHLTMMSIAGVIGGALFVGSGSVIHSAGPAAVLAYLAGGILVVLIMRMLGEMA 77
           L  SLK RH+TM+++ GVIG  LF+GSGS+I SAGPAA+L+Y  GG++V L+M MLGEMA
Sbjct: 6   LKQSLKQRHITMIALGGVIGAGLFMGSGSLIASAGPAAILSYFIGGLVVTLVMFMLGEMA 65

Query: 78  TSSPDTGSFSTYADRAIGRWAGFTIGWLYWWYWVILMAWEAYVAGKILHGFFPDVSVNVF 137
             +PD GSFSTYA+  +G WAGF +GWLYW+  ++ +  EA + G ILH F P + +   
Sbjct: 66  CRNPDAGSFSTYANTYLGDWAGFAVGWLYWFKSMMTITLEAVLLGAILHDFLPWLPIWAG 125

Query: 138 VLATTLLLITVNFFNVKHYGEFEFWFALIKVIAIVCFLIVCTAAVMNIWQFGEVRGISHL 197
                + L+  N ++V+ + E E+W A +KV  I+ F+++  + ++ +       G+ +L
Sbjct: 126 AFLMLVTLMASNAYSVRSFAEVEYWLAAMKVATILIFMLLGVSILLGLHSDIPAPGLINL 185

Query: 198 TA-EGFMPNGITTVIGALLGVMFAFLGAEIVTIAASEAKDPAAQIVKATNSVVWRVCLFY 256
           TA +GFMPNG++ V+  ++ V+F+  G+EI  +AA E+++P   +++A  SV+ RV LFY
Sbjct: 186 TAHDGFMPNGLSPVMAGVIVVIFSLGGSEIAAVAAGESENPRQNVIRAIKSVILRVMLFY 245

Query: 257 VGSIFLIVCLVPWNDPHLGVSGYGAYRRTLELLGVPYAELLMNFVVLTSVSSCLISGHYT 316
           VGS+ +++  +PW D     S Y +      L G   A + M  V+  S  S + S  ++
Sbjct: 246 VGSVSILILCLPWTDKANLASPYVS---LFSLAGFGGAAVAMKLVLFVSFMSVMNSFMFS 302

Query: 317 ASRMLFSLAQRGDAPSFFKITRAGTGVPVYAIMGSCAVAVVCALINFSETLRPKDVLDTL 376
            SRMLFSL+QRG AP  F  T A  GVP+ A++ S ++  +   ++F   +   D+  TL
Sbjct: 303 NSRMLFSLSQRGHAPKLFSRTSA-KGVPINALLLSLSICTMILTVHF---VSGGDLFMTL 358

Query: 377 MNTTGMIALLVYLVIAFSQLRMRRKLIAEGKEVR-LKMWLFPWLTYLVIAFIVAALVTMA 435
             +TG + ++V++ I  + + MR K   E       + WLFP+   + +  ++A + T A
Sbjct: 359 AKSTGSLVMVVWIFIIIAHVAMRIKTRHEAVAPNAFRAWLFPYTNIIALFALLAVIGTQA 418

Query: 436 FMPDYQILVISTGIAAAVVVA 456
           F P  +     T +   +VVA
Sbjct: 419 FDPASRFQFWFTVLTVLLVVA 439