Pairwise Alignments

Query, 391 a.a., putative inner membrane transport protein from Pseudomonas putida KT2440

Subject, 390 a.a., Inner membrane transport protein YdhP from Xanthobacter sp. DMC5

 Score =  472 bits (1215), Expect = e-138
 Identities = 252/385 (65%), Positives = 299/385 (77%)

Query: 1   MRINPPLVALAIGAFGIGVTEFAPMGMLPSIATDLGVSIPAAGLLVSAYAIGVLIGAPLM 60
           M+IN PLVALAIGAFGIGVTEF+PMGMLP IA+DLGVSIPAAGLLVSAYA GVL+ AP+M
Sbjct: 1   MKINLPLVALAIGAFGIGVTEFSPMGMLPIIASDLGVSIPAAGLLVSAYAFGVLVTAPIM 60

Query: 61  TLATVKIPRRYLLIGLMAIFTLGNLMSALASDYASLLVARVVTSLNHGAFFGIGSIVAAS 120
           TL+   +PRR LL+  M IFT+GNL+SA A  Y  LL  R+VTS NHGAFFG+G++VAAS
Sbjct: 61  TLSFASMPRRRLLVLSMGIFTIGNLISAFADGYWMLLAGRIVTSFNHGAFFGVGAVVAAS 120

Query: 121 VVPPEKRAGAVAAMFMGLTLATIGGVPLATWLGEMLGWRTAFWGIAGLGLVAMTTLWYAL 180
           VVP +KRAGAVAAMF GLT+ATIGGVPLA W+GE +GWR AF+GIA +G +AM  +  +L
Sbjct: 121 VVPADKRAGAVAAMFSGLTIATIGGVPLAAWVGEAVGWRMAFFGIAVIGAIAMVAVRLSL 180

Query: 181 PNVASPKGEGAMAEIRVLGRRPVLAALLLTVVGSSAMFTVFTYIAPILQHEAAASTPFVT 240
           P +         AE++VL R PVLAALLLTVV SSAMFTVFTYIAPILQ E  A + FVT
Sbjct: 181 PPLEVQGESDMRAELKVLMRGPVLAALLLTVVSSSAMFTVFTYIAPILQVETGAVSGFVT 240

Query: 241 AMLVLFGVGLTLGNVWGGKAADRSIDRTLILSLAGLIAVLLVFPLVLDWPLPTALAILVW 300
           AMLV++G+GL LGN  GG+ ADRS+D TLI SL  +  +L++F   +   L T   + +W
Sbjct: 241 AMLVVYGLGLALGNWLGGRFADRSLDGTLIGSLTAVAVLLVLFVPGMHSHLATVPLVFLW 300

Query: 301 GAASFALVPPLQMRVMEAAKDAPNLASAVNIGAFNLGNAIGAALGGAVINAGLGYPAISL 360
           G ASFALVPPLQMRV+  A +AP+LASA+NIGAFNLGNA+GAALGGAVI+AGLGYPA+SL
Sbjct: 301 GIASFALVPPLQMRVVHEASEAPHLASAMNIGAFNLGNALGAALGGAVIDAGLGYPAVSL 360

Query: 361 AGAAMAALGLVLVLLFAWRGRGVVA 385
           AGA  A  GL   LL     RG+ A
Sbjct: 361 AGAGTALAGLAFTLLLRRGRRGLEA 385