Pairwise Alignments

Query, 391 a.a., putative inner membrane transport protein from Pseudomonas putida KT2440

Subject, 385 a.a., Putative transporter from Variovorax sp. SCN45

 Score =  171 bits (434), Expect = 2e-47
 Identities = 117/346 (33%), Positives = 175/346 (50%), Gaps = 12/346 (3%)

Query: 7   LVALAIGAFGIGVTEFAPMGMLPSIATDLGVSIPAAGLLVSAYAIGVLIGAPLMTLATVK 66
           L AL  G F IG       G L  I+  L VS+  AG L++A A  + IGAPL+  A   
Sbjct: 10  LWALLAGNFVIGTGVMVVPGTLNEISASLAVSVATAGQLITAAAAVMCIGAPLLAAAVAG 69

Query: 67  IPRRYLLIGLMAIFTLGNLMSALASDYASLLVARVVTSLNHGAFFGIGSIVAASVVPPEK 126
             RR LL   +  + +G+ ++AL   + +LL  R++T +    F    +  A  +VPPE+
Sbjct: 70  WDRRQLLALTLLWYAVGHALAALMPSFGALLPVRMLTVIAPAIFTPQAAACAGMLVPPEQ 129

Query: 127 RAGAVAAMFMGLTLATIGGVPLATWLGEMLGWRTAFWGIAGLGLVAMTTLWYALPNVASP 186
           R  AV  +F+G ++A++ G+P+   +G  LGWR AF  IA L +V+  ++W+ LPN   P
Sbjct: 130 RGRAVTFVFLGWSMASVLGLPIGALIGGHLGWRMAFGAIALLSVVSAASIWFTLPNGIRP 189

Query: 187 KGEGAMAEIRVLGRRPVLAALL-LTVVGSSAMFTVFTYIAPILQHEAAASTPFVTAMLVL 245
               A A  RVL R PVL  ++ +T +  +  F +F+Y  PIL+    A    ++ M  L
Sbjct: 190 AALTAAAWSRVL-RSPVLMGIVSVTALQGTGQFVLFSYFGPILKQSFGADATTLSVMWAL 248

Query: 246 FGVGLTLGNVWGGKAADRSIDRTLILSLAGLIAVLLVFPLVLDWPLPTALA-----ILVW 300
           FG    +GN+       R IDR     +  +  VL+   L+L WP  + LA     ++ W
Sbjct: 249 FGACGLIGNM----VVSRFIDRVGAGRMVLITTVLIALSLLL-WPTASTLAWLAVVLVPW 303

Query: 301 GAASFALVPPLQMRVMEAAKDAPNLASAVNIGAFNLGNAIGAALGG 346
           G   FA     Q R++  A      + A+N      G A+GAALGG
Sbjct: 304 GLGCFATNSAQQARLVGLAPALAPGSVALNSSGIYTGQAVGAALGG 349