Pairwise Alignments

Query, 299 a.a., Transcriptional regulator, LysR family from Pseudomonas putida KT2440

Subject, 304 a.a., LysR family transcriptional regulator YafC from Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868

 Score =  187 bits (475), Expect = 3e-52
 Identities = 111/291 (38%), Positives = 164/291 (56%), Gaps = 4/291 (1%)

Query: 7   SGEMEIFAKVAQAGSLSAAARALGLTPSAVSRILARTEQRLGTRLLLRTTRALTLTPEGE 66
           S E+ IF  V ++GS S AA  LG   SAVSR + + E +LG  LL RTTR L+LT EGE
Sbjct: 5   SEELAIFVAVVESGSFSRAAEQLGQANSAVSRAVKKLEMKLGVSLLNRTTRQLSLTEEGE 64

Query: 67  AYLRGARRVLADMLEVE-EAITDQGVPRGRLRVSAALGHARLTVVPLLAAFSARYPQVLV 125
            Y R  +++L +M   E E +  +  PRG LR+ AA       ++PL+  F  RYP++ +
Sbjct: 65  RYFRRVQQILQEMAAAETEIMESRNTPRGLLRIDAATPVMLHFLMPLIKPFRERYPEITL 124

Query: 126 DLTLSDEVADILGGQADVALRFGHLPDSSLSARAIGETGQVVVASPEYLQRYGTPLEPED 185
            L  S+   +++  + DVA+R G L DSSL AR +  + + ++ASP+Y+ R+G P   E+
Sbjct: 125 SLVSSETFINLIERKVDVAIRAGTLTDSSLRARPLFTSYRKIIASPDYIARFGKPETVEE 184

Query: 186 LARHNCLRFNFRRAMPDWPFH-RDGHTFSLKVKGNIECSSGEALAQLARLGAGVARIGTF 244
           L RH CL F+   ++  WP    DG     ++K  I  +SGE L QL   G G+A +  +
Sbjct: 185 LKRHLCLGFSEPVSLNTWPIACSDGQLH--EIKCGISSNSGETLKQLCLNGNGIACLSDY 242

Query: 245 TVADDLANGQLVPLLEAYNPGDREPIHAVFVGGPAMPARVRVFVDFLVEQL 295
            +  ++A G+LV LL         P  AV+    A+  R+R F+DFL E +
Sbjct: 243 MIDKEIARGELVELLADKRLPVEMPFSAVYYSDRAVSTRIRAFIDFLSEYI 293