Pairwise Alignments

Query, 299 a.a., Transcriptional regulator, LysR family from Pseudomonas putida KT2440

Subject, 304 a.a., DNA-binding transcriptional regulator YafC from Escherichia coli ECRC101

 Score =  187 bits (476), Expect = 2e-52
 Identities = 111/291 (38%), Positives = 163/291 (56%), Gaps = 4/291 (1%)

Query: 7   SGEMEIFAKVAQAGSLSAAARALGLTPSAVSRILARTEQRLGTRLLLRTTRALTLTPEGE 66
           S E+ IF  V ++GS S AA  LG   SAVSR + + E +LG  LL RTTR L+LT EGE
Sbjct: 5   SEELAIFVSVVESGSFSRAAEQLGQANSAVSRAVKKLEMKLGVSLLNRTTRQLSLTEEGE 64

Query: 67  AYLRGARRVLADMLEVEEAITD-QGVPRGRLRVSAALGHARLTVVPLLAAFSARYPQVLV 125
            Y R  + +L +M   E  I + +  PRG LR+ AA       ++PL+  F  RYP+V +
Sbjct: 65  RYFRRVQSILQEMAAAESEIMETRNTPRGLLRIDAATPVVLHFLMPLIKPFRERYPEVTL 124

Query: 126 DLTLSDEVADILGGQADVALRFGHLPDSSLSARAIGETGQVVVASPEYLQRYGTPLEPED 185
            L  S+ + +++  + DVA+R G L DSSL AR +  + + ++ASP+Y+ RYG P   +D
Sbjct: 125 SLVSSETIINLIERKVDVAIRAGTLTDSSLRARPLFNSYRKIIASPDYISRYGKPETIDD 184

Query: 186 LARHNCLRFNFRRAMPDWPFH-RDGHTFSLKVKGNIECSSGEALAQLARLGAGVARIGTF 244
           L +H CL F    ++  WP    DG     +VK  +  +SGE L QL   G G+A +  +
Sbjct: 185 LKQHVCLGFTEPASLNTWPVACSDGQLH--EVKYGLSSNSGETLKQLCLSGNGIACLSDY 242

Query: 245 TVADDLANGQLVPLLEAYNPGDREPIHAVFVGGPAMPARVRVFVDFLVEQL 295
            +  ++A G+LV L+         P  AV+    A+  R+R F+DFL E +
Sbjct: 243 MIDREIARGELVELMADKVLPVEMPFSAVYYSDRAVSTRIRAFIDFLSEHV 293