Pairwise Alignments

Query, 410 a.a., porin-like protein from Pseudomonas putida KT2440

Subject, 438 a.a., porin from Pseudomonas simiae WCS417

 Score =  234 bits (598), Expect = 3e-66
 Identities = 151/435 (34%), Positives = 228/435 (52%), Gaps = 42/435 (9%)

Query: 14  ALAASLPL--QALAEGFVDDAKASLTLRNFYMNRDYTGTASQGKAEEWTQSFIFDFKSGY 71
           ALA SL    QA A GF+DD+KASL LRNFY N+D T  A     +EW Q+F+F+++SG+
Sbjct: 8   ALAVSLGAAQQAAASGFIDDSKASLDLRNFYYNQD-TRNAKAASDKEWGQAFMFNYQSGF 66

Query: 72  TPGVVGFGVDVLGLYSIKLD--GGKGTAGTQLLPVH----DDGRPADDFGRTALAGKMRV 125
           T G VG G+D+   Y ++LD  G  G AG    P      DDG+   DF +T + GK+R+
Sbjct: 67  TEGTVGLGLDLQEWYGLRLDASGRAGKAGADNTPGSVFPLDDGKAVHDFSKTGVTGKLRI 126

Query: 126 SRTELKVGEWSPTLPILRADDGRSLPQTLQGAQVTSNELAGLSLYGGQFRQNSPRNDASM 185
           ++T+LK G   P LP+L  +DGR LPQT +G QV S +   ++L  G+  Q   RN ++ 
Sbjct: 127 AQTQLKAGNLMPKLPVLTTEDGRLLPQTFRGYQVESKDFRDVNLIAGKIEQVMDRNSSNG 186

Query: 186 QDMSLFTRT----AFTSDRFNFAGGEYRFNQERTLVGAWYAQLEDIYQQRYFQVQHQQPL 241
           Q +S+           S++F + G +Y  + +R  V  +YA LE+ YQQ +  + H   L
Sbjct: 187 QGLSIAGANDPVKGKASNQFYYGGVDYAVS-KRLQVQYYYASLENFYQQHFLGLVHNWQL 245

Query: 242 GNWVLGANLGYFWGKDDG--------------------GAKAGELNNRTASGLFSAKLGG 281
               L ++L YF+   DG                    G  AG+++NR  S +F+  L G
Sbjct: 246 PVGQLKSDLRYFYSTADGKNGSVAGRGEGYVSSGYYGPGVNAGKVDNRLWSAMFTYALSG 305

Query: 282 NTFYVGLQKVMGDDEWFRVNGASGGT--LANDAFGSSYESARERSWQVRHDFNFVVLGIP 339
           ++  +G QK  G  ++  +N   G +  L  ++    + +A E++    + ++F  LG+P
Sbjct: 306 HSLSLGYQKTTGQSDFPHINQGQGRSLYLITNSQSLKFVNAGEQATVGSYAYDFAGLGVP 365

Query: 340 GLTLMNRYIHGYNVHNASTQGRESE----LAYVVQSGPFKALNLKWRNSSQRRDWGSTNS 395
           GL     YIHG ++        E E    L YV+ +G  K L   WR++  R +   T  
Sbjct: 366 GLRSSVTYIHGSHIRTVGRDNSEWERDLRLDYVIPTGTLKGLGFTWRSAVLRGN--DTAD 423

Query: 396 FDENRLIVSYPLSLL 410
            DE RLIVSY + L+
Sbjct: 424 KDETRLIVSYSIPLM 438