Pairwise Alignments

Query, 410 a.a., porin-like protein from Pseudomonas putida KT2440

Subject, 439 a.a., porin from Pseudomonas simiae WCS417

 Score =  234 bits (597), Expect = 4e-66
 Identities = 152/436 (34%), Positives = 235/436 (53%), Gaps = 41/436 (9%)

Query: 10  VPTFALAASLPLQALAEGFVDDAKASLTLRNFYMNRDYT-GTASQGKAEEWTQSFIFDFK 68
           V T +L  +L   A A+ F+ D+KA+L++RNFY N D   GTA+  K EEW Q+FI +++
Sbjct: 10  VLTGSLGVALSPLASAD-FLSDSKANLSMRNFYFNNDNRDGTAAPSKTEEWGQAFILNYQ 68

Query: 69  SGYTPGVVGFGVDVLGLYSIKLDGGKGT-AGTQLLPVHDDGRPADDFGRTALAGKMRVSR 127
           SG+T G VGFG+D +G+  I LD G G   G+ ++P +DDG+  D++ R     K R ++
Sbjct: 69  SGFTDGTVGFGLDAIGMLGITLDSGAGRHVGSSMIP-NDDGKATDNWARGGATAKARFAK 127

Query: 128 TELKVGEWSPTLPILRADDGRSLPQTLQGAQVTSNELAGLSLYGGQFRQNSPRNDASMQD 187
           +EL+ G   P LPIL ++DGR LPQ+  G Q+TS ++  L+L GGQ +  + R  +    
Sbjct: 128 SELRYGYLRPNLPILVSNDGRLLPQSFDGGQITSKDIDNLTLIGGQLQHTTGRGSSDRSG 187

Query: 188 MSLFTRTAFTSDRFNFAGGEYRFNQERTLVGAWYAQLEDIYQQRYFQVQHQQPLGNW-VL 246
           +++   T   S+ FN+AG +Y+  ++  ++  +YA LED YQQ +  + H  PLG++  L
Sbjct: 188 LAVAGGTQ-ESNTFNYAGADYQVTKD-LMLQYYYANLEDYYQQHFAGLIHVLPLGDYGSL 245

Query: 247 GANLGYFWGKDDG----------GAK--------AGELNNRTASGLFSAKLGGNTFYVGL 288
             +L YF    DG          G K         GE++N T S  F   LG +    G 
Sbjct: 246 KTDLRYFKTTSDGKNSSVAGRAEGYKLGGYTKNGTGEIDNNTWSAAFIYSLGPHAITAGY 305

Query: 289 QKVMGDDEWFRVN---------GASGGTLANDAFGSSYESARERSWQVRHDFNFVVLGIP 339
           Q+V  D  + ++N         G S   L  D    ++  A ER+   ++ ++F  LG+P
Sbjct: 306 QQVSDDSNFAQLNQGGLVNKGEGGSSLYLYTDRTVQTFIQAGERTAFAQYAYDFASLGVP 365

Query: 340 GLTLMNRYIHGYNV-----HNASTQGRESELAYVVQSGPFKALNLKWRNSSQRRDWGSTN 394
           GL     Y+ G ++     ++AS   R+  L YVVQSG FK +   WRN   R +     
Sbjct: 366 GLKASVMYLKGDHILTASGNDASEWERDISLDYVVQSGTFKNVGFGWRNGVSRSE--VAR 423

Query: 395 SFDENRLIVSYPLSLL 410
             D+NR+ V+Y + L+
Sbjct: 424 DQDQNRVFVNYSIPLM 439