Pairwise Alignments

Query, 410 a.a., porin-like protein from Pseudomonas putida KT2440

Subject, 427 a.a., porin from Pseudomonas simiae WCS417

 Score =  263 bits (671), Expect = 1e-74
 Identities = 155/404 (38%), Positives = 225/404 (55%), Gaps = 28/404 (6%)

Query: 28  FVDDAKASLTLRNFYMNRDYTGTASQGKAEEWTQSFIFDFKSGYTPGVVGFGVDVLGLYS 87
           F+ D+KA L L+N+Y NRDY   A Q K EEW Q FI + KSG+T G VGFGVDV+G+  
Sbjct: 29  FIKDSKADLDLKNYYFNRDYREDAGQSKREEWAQGFILNLKSGFTEGTVGFGVDVVGMLG 88

Query: 88  IKLDGGKGTAGTQLLPVHDDGRPA---------DDFGRTALAGKMRVSRTELKVGEWSPT 138
           +KLD     +G+ LL   +D  P          D++ +  + GK+R +++EL+ G   P 
Sbjct: 89  LKLDSSPDRSGSGLLSRDNDATPGKPSYSKRAHDEYSKYGVTGKVRFAQSELRSGYLLPD 148

Query: 139 LPILRADDGRSLPQTLQGAQVTSNELAGLSLYGGQFRQNSPRNDASMQDMSLFT-----R 193
           LP L+ +  R  PQT +G QVTS ++AGL+L GGQ  Q   R     +DM L +     +
Sbjct: 149 LPTLQPNTSRLFPQTFRGTQVTSTDIAGLALIGGQIDQTKQRESTEYEDMGLTSQSGAYK 208

Query: 194 TAFTSDRFNFAGGEYRFNQERTLVGAWYAQLEDIYQQRYFQVQHQQPLGNWVLGANLGYF 253
           +   SDRF FAGG+Y+     TL    +AQLEDIYQQ +  +++   LG   L  ++ YF
Sbjct: 209 STAKSDRFRFAGGDYKLTPGMTL-SYHFAQLEDIYQQHFVGLKNSFALGGGTLKTDIRYF 267

Query: 254 WGKDDGGAKAGELNNRTAS--GLFSAKLGGNTFYVGLQKVMGDDEWFRVNGASGGTLAND 311
                G   AG+++NR  S   +FS K  G++   G Q+  GD  +  V+G +   L ++
Sbjct: 268 DADKSGAGLAGKVDNRALSTRAMFSYK--GHSLGGGYQEQYGDTPFTYVDG-TNTYLFSE 324

Query: 312 AFGSSYESARERSWQVRHDFNFVVLGIPGLTLMNRYIHG--YNVHNASTQGRESE----L 365
              S++    ER W  R+DF+F  LG+PGLT   R+  G    V   + +GRE E    L
Sbjct: 325 YQLSNFSQTNERVWHARYDFDFAALGVPGLTFSTRWAKGDQAQVKGFAGEGREWERDIDL 384

Query: 366 AYVVQSGPFKALNLKWRNSSQRRDWGSTNSFDENRLIVSYPLSL 409
            YV QSG  K ++L+WRN   + ++      +ENR+IV Y ++L
Sbjct: 385 GYVFQSGTLKGVSLRWRNGLSKANY--LRDMNENRVIVGYTVAL 426