Pairwise Alignments

Query, 410 a.a., porin-like protein from Pseudomonas putida KT2440

Subject, 433 a.a., outer-membrane porin D from Pseudomonas putida KT2440

 Score =  261 bits (668), Expect = 2e-74
 Identities = 165/428 (38%), Positives = 238/428 (55%), Gaps = 29/428 (6%)

Query: 7   YPLVP------TFALAASLPLQALAEGFVDDAKASLTLRNFYMNRDYT---GTASQG--K 55
           +PL P       F L A +  QA   GF++DA A +  RN Y NRD+     ++SQG  K
Sbjct: 9   FPLAPGRRVTGLFLLCAGVNAQAA--GFLEDASAKIEARNVYFNRDFRDGYSSSSQGASK 66

Query: 56  AEEWTQSFIFDFKSGYTPGVVGFGVDVLGLYSIKLDGGKGTAGTQLLPV--HDDGRPADD 113
            EEW Q FI + +SGYT G VG GVD LG++  KLD     + + LLP   HD  R AD 
Sbjct: 67  REEWAQGFILNVQSGYTQGPVGVGVDALGMFGFKLDSSPADSNSGLLPSSGHDPRRSADQ 126

Query: 114 FGRTALAGKMRVSRTELKVGEWSPTLPILRADDGRSLPQTLQGAQVTSNELAGLSLYGGQ 173
           + +  LA K++VS T LK G   P +P+L+ +DGR LP    GA +TS EL  L     +
Sbjct: 127 YAKMGLAAKVKVSNTVLKYGSMMPDVPLLKYNDGRLLPTLFHGAMLTSEELHDLKFTLAR 186

Query: 174 FRQNSPRNDASMQDMSLFTRTA-----FTSDRFNFAGGEYRFNQERTLVGAWYAQLEDIY 228
             + + R+    QD+ +  +         +D F+ AG +YRFN ER       A+LE+IY
Sbjct: 187 LDKYTARDSTDRQDIRVHCKNKRYACDTEADHFDLAGVDYRFN-ERFSAQYQVAKLENIY 245

Query: 229 QQRYFQVQHQQPLGNWVLGANLGYFWGKDDGGAKAGELNNRTASGLFSAKLGGNTFYVGL 288
           +Q +  +   QPL    L A++      D G A+AGE+++R  SG+    LGG+    G 
Sbjct: 246 RQHFLGLVASQPLPVGSLSADMRLIKSDDIGNARAGEIDHRAFSGMLGYSLGGHKLSAGW 305

Query: 289 QKVMGDDEWFRVNGASGGTLANDAFGSSYESARERSWQVRHDFNFVVLGIPGLTLMNRYI 348
           Q++ G+     ++G S   L N A  + + +A+ERSWQVR+D++F  LG+PGLT   RYI
Sbjct: 306 QRMYGNSAMPYLDG-SNPYLVNYAQVNDFAAAQERSWQVRYDYDFKALGVPGLTFFTRYI 364

Query: 349 HGYN--VHNASTQG----RESELAYVVQSGPFKALNLKWRNSSQRRDWGS-TNSFDENRL 401
           +G N  V  +S +G    R++E  Y VQSG FK ++++ RNS+ R ++       DE R+
Sbjct: 365 NGDNIKVPGSSVEGKEWERDTEFKYQVQSGTFKDVSVRLRNSTYRSNYERWARDMDETRV 424

Query: 402 IVSYPLSL 409
           IVSY  S+
Sbjct: 425 IVSYNFSI 432