Pairwise Alignments

Query, 410 a.a., porin-like protein from Pseudomonas putida KT2440

Subject, 417 a.a., porin-like protein from Pseudomonas putida KT2440

 Score =  449 bits (1156), Expect = e-131
 Identities = 220/407 (54%), Positives = 283/407 (69%), Gaps = 8/407 (1%)

Query: 9   LVPTFALAASLPLQALAEGFVDDAKASLTLRNFYMNRDYTGT-ASQGKAEEWTQSFIFDF 67
           L  + A    LP  A   GF++DAK  LTLRN+Y NRD+    A++GK EEW Q FIF F
Sbjct: 13  LAVSLAFGLGLPAWAQEGGFLEDAKGGLTLRNYYFNRDFRDPGAAKGKVEEWAQGFIFKF 72

Query: 68  KSGYTPGVVGFGVDVLGLYSIKLDGGKGTAGTQLLPVHDDGRPADDFGRTALAGKMRVSR 127
            SGYTPG++GFG+D + L+ +KLD G GT+G++LLPVHDDGR ADD+GR  LA K+R+S 
Sbjct: 73  SSGYTPGLIGFGLDGIALFGVKLDSGGGTSGSELLPVHDDGRAADDYGRAGLAAKLRMSA 132

Query: 128 TELKVGEWSPTLPILRADDGRSLPQTLQGAQVTSNELAGLSLYGGQFRQNSPRNDASMQD 187
           TELKVGE  P +P+LR DDGR LPQT +GA + S E+ GLSL  GQ+R+ S R+ + MQD
Sbjct: 133 TELKVGELLPDIPLLRYDDGRLLPQTFRGAMLDSREIEGLSLQAGQYREVSLRHSSDMQD 192

Query: 188 MSLFTRTAFTSDRFNFAGGEYRFNQERTLVGAWYAQLEDIYQQRYFQVQHQQPLGNWVLG 247
           +S +     TSD FN+AG EYRFNQ+RTL+GAW++QLEDIYQQ YF + H Q +G W LG
Sbjct: 193 LSAWAAPGVTSDGFNYAGAEYRFNQQRTLIGAWHSQLEDIYQQSYFNLLHSQRVGEWTLG 252

Query: 248 ANLGYFWGKDDGGAKAGELNNRTASGLFSAKLGGNTFYVGLQKVMGDDEWFRVNGASGGT 307
           ANLGYF  +DDG A+ G++ +RT   L SA   G+T Y+GLQKV GD +W  V G+SG T
Sbjct: 253 ANLGYFIDRDDGQARIGDIQSRTGYALLSASHSGHTLYLGLQKVSGDSQWMSVYGSSGRT 312

Query: 308 LANDAFGSSYESARERSWQVRHDFNFVVLGIPGLTLMNRYIHGYNVHNASTQG-----RE 362
           L ND F  ++ +A ERSWQVR+D+NF  LG+PGL  M RY HG N   A+        R+
Sbjct: 313 LGNDMFNGNFSNADERSWQVRYDYNFAALGVPGLLAMVRYGHGENATTAAGSNGKEWERD 372

Query: 363 SELAYVVQSGPFKALNLKWRNSSQRRDWGSTNSFDENRLIVSYPLSL 409
           +E+ Y  QSG  K LN++  N++ RR + S    D+ RLIVSYPL+L
Sbjct: 373 AEVNYTFQSGALKNLNIRLNNATNRRSFNS--DLDQTRLIVSYPLTL 417