Pairwise Alignments

Query, 410 a.a., porin-like protein from Pseudomonas putida KT2440

Subject, 447 a.a., tyrosine-specific outer membrane porin D from Pseudomonas putida KT2440

 Score =  192 bits (489), Expect = 1e-53
 Identities = 136/449 (30%), Positives = 214/449 (47%), Gaps = 41/449 (9%)

Query: 1   MKCRTLYPLVPTFALAAS----LPLQALAEGFVDDAKASLTLRNFYMNRDYTGT------ 50
           M CR+   L    ALA      +  +  A+GF++ +  S+  RNFY NRD   +      
Sbjct: 1   MTCRSPLTLAACLALAGVGSQVVAAEKSADGFMEGSTLSVLNRNFYFNRDNRDSVAPTHN 60

Query: 51  ----ASQGKAEEWTQSFIFDFKSGYTPGVVGFGVDVLGLYSIKLDGGKGTAGTQ----LL 102
               A  G +E W  + I  F+SG+T G VG G+D   +  +KLD G G  G +    +L
Sbjct: 61  PSKQADNGYSEAWGHAVITRFESGFTQGTVGVGLDAFAMLGLKLDTGGGRNGGRSSFDVL 120

Query: 103 PVHDDGRPADDFGRTALAGKMRVSRTELKVGEWSPTLPILRADDGRSLPQTLQGAQVTSN 162
           PV  DG+  D++ +   A K+R+  T LKVG+  P  P++ A D R LP++ +G  + ++
Sbjct: 121 PVDRDGQARDEYTKVGGAAKLRLFDTVLKVGDVFPANPVVAAGDSRLLPESFRGVTLENS 180

Query: 163 ELAGLSLYGGQFRQNS-PRNDASMQDMSLFTRTAFTSDRFNFAGGEYRFNQERTLVGAWY 221
            +  L+L  G+    S P +    ++   F      S    + GG+YR N E   V  + 
Sbjct: 181 SIKDLTLQAGRLHAMSQPMSSDLRENFVTFYGGPVDSPWIAYGGGDYRLN-EHVSVSLFS 239

Query: 222 AQLEDIYQQRYFQVQHQQPLGNWV-LGANLGYFWGKDDGGAKAGELNNRTASGLFSAKLG 280
           ++L+D + Q Y       PL   + L     Y+   D+G  + G  +N   S     + G
Sbjct: 240 SRLKDAWNQYYAGTSLSWPLSEALALIGGFNYYKAVDEGQQRLGAFDNDIWSAKLGVRFG 299

Query: 281 GNTFYVGLQKVMGDDEWFRVNGASGGTLANDAFGSSYESARERSWQVRHDFNFVVLGIPG 340
            +T  +  Q+  GDD++  +  +    L N    S + + +ERSW +R+D N    G+PG
Sbjct: 300 AHTLALTHQRNNGDDDFDYLRQSDSIFLDNSIQYSDFNAPKERSWMLRYDLNMAAYGVPG 359

Query: 341 LTLMNRYIHG----YNVHNASTQ---------------GRESELAYVVQSGPFKALNLKW 381
           L+ M RY  G    Y+  NA+                  R+ E+ YVVQ+G  K L+L+ 
Sbjct: 360 LSFMTRYGKGNDADYSNANATYMRRDVAGNPLTDQKRWERDIEVKYVVQTGAAKDLSLRV 419

Query: 382 RNSSQRRDWGSTNSFDENRLIVSYPLSLL 410
           R ++ R      +  DE R+IV YPLS+L
Sbjct: 420 RQATTRAT-AFESDLDEVRMIVEYPLSIL 447