Pairwise Alignments

Query, 410 a.a., porin-like protein from Pseudomonas putida KT2440

Subject, 444 a.a., outer-membrane porin E from Pseudomonas putida KT2440

 Score =  196 bits (499), Expect = 9e-55
 Identities = 148/446 (33%), Positives = 210/446 (47%), Gaps = 53/446 (11%)

Query: 12  TFALAASLPL---QALAEGFVDDAKASLTLRNFYMNRDYTGTASQGKAEEWTQSFIFDFK 68
           + ALA +L +   QA A GFV+D+K SL+ R  Y N D   +    K  E  Q F  D+ 
Sbjct: 5   SLALAVALGVLAQQAGAAGFVEDSKLSLSSRTMYFNDDNRESGIDQK--ESGQGFKLDYL 62

Query: 69  SGYTPGVVGFGVDVLGLYSIKLDGGKGT---AGTQLLPVHDDGRPADDFGRTALAGKMRV 125
           SG+T G VGFGVDV  L+ I LDGG+G+   A     P   DG    D+ R     K R 
Sbjct: 63  SGFTQGTVGFGVDVQALWGIHLDGGRGSRPDANNTFFPSDSDGSAVHDWARIGGNAKARF 122

Query: 126 SRTELKVGE-WSPTLPILRADDGRSLPQTLQGAQVTSNELAGLSLYGGQFRQNSPRNDAS 184
           S+TE+  G   +P LPIL ++DGR LPQT +G  + S E+  L++  GQ      R  AS
Sbjct: 123 SKTEVHYGSALAPMLPILVSNDGRLLPQTFEGGTLQSKEIDNLTINAGQLTHAMGR--AS 180

Query: 185 MQDMSLFTRTAF-TSDRFNFAGGEYRFNQERTLVGAWYAQLEDIYQQRYFQVQHQQPLG- 242
                L    AF  S++F FAGG+Y+   + TL   +Y+ LED Y+Q +    H   +  
Sbjct: 181 SNRTGLSVSGAFRDSNKFQFAGGDYKLTPDLTL-QYYYSNLEDFYKQHFLGATHVFKIAD 239

Query: 243 NWVLGANLGYFWGKDDG---------------GAKAGELNNRTASGLFSAKLGGNTFYVG 287
           N     +L YF    DG                  +GE++N+T S +F+  LGG+   +G
Sbjct: 240 NQSFKTDLRYFDSSSDGKNGQTGYAFDNNGGYAKNSGEVDNKTWSAMFTYTLGGHALMLG 299

Query: 288 LQKVMGDDEWF-----------------RVNGASGGTLANDAFGSSYESARERSWQVRHD 330
            Q+V GDD  F                   NG +   L  D+  + +  A E +   ++ 
Sbjct: 300 HQQV-GDDGGFVWLNQGSVRKDGSTSSLEGNGGASFYLFTDSMINQFARAGENTTFGQYS 358

Query: 331 FNFVVLGIPGLTLMNRYIHGYNVHNASTQG------RESELAYVVQSGPFKALNLKWRNS 384
           ++F  LG+PGL     Y+ G +V N S  G      R++ + Y +Q G  K L    R  
Sbjct: 359 YDFAALGVPGLKASVSYLRGDDVRNRSGDGTYNEWERDARVDYTLQEGTLKGLGFSLRQG 418

Query: 385 SQRRDWGSTNSFDENRLIVSYPLSLL 410
             R    S    D+ R IV+Y  + L
Sbjct: 419 VYRGSGESALDKDQTRFIVNYTYNFL 444