Pairwise Alignments

Query, 410 a.a., porin-like protein from Pseudomonas putida KT2440

Subject, 447 a.a., tyrosine-specific outer membrane porin D from Pseudomonas putida KT2440

 Score =  210 bits (535), Expect = 6e-59
 Identities = 138/449 (30%), Positives = 215/449 (47%), Gaps = 41/449 (9%)

Query: 1   MKCRTLYPLVPTFALAASLPLQALAE----GFVDDAKASLTLRNFYMNRDYTGTAS---- 52
           MK +    L    AL+ S  + A AE    GF++ +  ++  RNFY NRD   + +    
Sbjct: 1   MKIKVPLYLAAVSALSGSYAISAQAEDKPEGFIEGSSLTVLNRNFYFNRDNRDSTAPTYN 60

Query: 53  ------QGKAEEWTQSFIFDFKSGYTPGVVGFGVDVLGLYSIKLDGGKGTAGTQ----LL 102
                  G +E W  + I  F SG+T G VGFGVD   +  +KLD G G  G +    +L
Sbjct: 61  SGKGNTNGYSEAWAHAIISKFNSGFTQGTVGFGVDAFAMIGLKLDTGDGRNGGRSSFDVL 120

Query: 103 PVHDDGRPADDFGRTALAGKMRVSRTELKVGEWSPTLPILRADDGRSLPQTLQGAQVTSN 162
           PV + G   D++ +   A K+R+  T +KVG+  P+ P++ + D R LP++ +G  V + 
Sbjct: 121 PVDNKGEARDEYTKVGGAAKVRLFDTIVKVGDVFPSTPVVASGDSRLLPESFRGVTVENT 180

Query: 163 ELAGLSLYGGQFRQNSPRNDASMQDMSL-FTRTAFTSDRFNFAGGEYRFNQERTLVGAWY 221
            + GL+L GG+    S    +++ D  + F      S    + GG+Y  N   T V  + 
Sbjct: 181 SIQGLTLQGGRLHAMSQPVSSNLNDNFVTFYGGPVNSPWIGYGGGDYSINDNWT-VSVYA 239

Query: 222 AQLEDIYQQRYFQVQHQQPLGN-WVLGANLGYFWGKDDGGAKAGELNNRTASGLFSAKLG 280
           +QL+D++ Q Y       PL +   L     Y+   D+G  + GE +N   S     + G
Sbjct: 240 SQLKDVWNQYYAGTSVVYPLSDDLALIGGFNYYKAVDEGKKRLGEFDNNIWSAKVGVRYG 299

Query: 281 GNTFYVGLQKVMGDDEWFRVNGASGGTLANDAFGSSYESARERSWQVRHDFNFVVLGIPG 340
            +T  +  Q+  GDD++  +  +    + N    S + S +ERSW +R+D NF   GIPG
Sbjct: 300 AHTLALSHQRNNGDDDFDYLRQSDSIFVDNSIQYSDFNSPKERSWMLRYDLNFTSYGIPG 359

Query: 341 LTLMNRYIHGYN-------------------VHNASTQGRESELAYVVQSGPFKALNLKW 381
           LT M RY  G                     + N     R+ E+ YVVQ+GP K L+ + 
Sbjct: 360 LTFMTRYARGSGADYSNANQFYMRTDDNGNPLDNQKRWERDVEVKYVVQTGPAKDLSFRL 419

Query: 382 RNSSQRRDWGSTNSFDENRLIVSYPLSLL 410
           R ++ R      +  DE R+I+ YPLS+L
Sbjct: 420 RQATTRAT-AFESDLDETRVIIEYPLSIL 447