Pairwise Alignments

Query, 308 a.a., Transcriptional regulator, LysR family from Pseudomonas putida KT2440

Subject, 303 a.a., transcriptional regulator from Pseudomonas simiae WCS417

 Score =  178 bits (452), Expect = 1e-49
 Identities = 104/289 (35%), Positives = 160/289 (55%), Gaps = 3/289 (1%)

Query: 12  SIELFCLAAELGSFTAAALAAGVTPAAVSRSISRLEERLGSRLFVRTTRSIRLTEGGRGY 71
           ++ +F    EL  F  AA +  +  A+V+  I +LE  LG +L  RTTR +  T  G  Y
Sbjct: 6   AMRVFTRIVELRGFAKAADSLQLPRASVTVLIKQLEAHLGVQLLQRTTRQVSPTLDGAAY 65

Query: 72  YEQCRQALTQLVEAERVVTGQQQEPSGTLRISLPTTYGHHRILPLLPEFRRRYPKVQVDI 131
           Y++C Q L+ L E E V +  +Q P GTL + +P+  G   ++P LP+F  RYP+++++I
Sbjct: 66  YQRCVQLLSDLEETEAVFSASRQSPRGTLSVDMPSGIGRLIVIPALPDFTARYPQIELEI 125

Query: 132 HLGNRNIDFVGEGYDLAIRVRAQPDSTLIARPLEDARLVVVATPDYLEHAGAPQSLEELA 191
            L +R +D + EG D  +R     D +L+ARPL     + +A+P YL+  G P S E+LA
Sbjct: 126 GLNDRPVDLIREGVDCVLRGGLALDESLVARPLAMMDQLTLASPCYLQRRGVPTSFEDLA 185

Query: 192 QHDCIQFELPSSGRRIAWLFDEEGREREV-LTEGGYVCSDDVLGGVTLAKHGAGLFQTYR 250
            H  +++   +SG+R    F+  G  + V L +G  V S D  G     + G GL Q   
Sbjct: 186 NHQMVEYVSSASGKRFGLEFEVGGEWQTVNLPKGLAVNSSD--GYFAACEAGFGLIQAPH 243

Query: 251 FIVERELAEGSLVEVLRPFAGRSRPFTLLYPQGRHMPLRLRAFVDFIMD 299
           +   R+LA G+LVEVL   A      + LYP  R + LR+R FVD++++
Sbjct: 244 YHAMRQLAAGTLVEVLPRLAVPKMALSALYPPHRQLSLRVRVFVDWLVE 292