Pairwise Alignments

Query, 469 a.a., putative phage integrase from Pseudomonas putida KT2440

Subject, 404 a.a., Integrase from Sphingobium sp. HT1-2

 Score = 91.3 bits (225), Expect = 5e-23
 Identities = 94/369 (25%), Positives = 152/369 (41%), Gaps = 63/369 (17%)

Query: 45  EFKLDGARTRKRLGSWPKKSLAQIRSERDEARVLVTKGLHPTLAAKAARIEAQAAIATTI 104
           +F+  G   +  LG +P   L + R +RDEAR  +  G+ P  A   A+IEA+AA  TT 
Sbjct: 40  KFRFHGIEKKMALGRYPDVGLKEARQKRDEAREQLEGGVDPLAARIQAKIEAEAAARTTF 99

Query: 105 AEAEREAAENKTVSDLFDEWI-RDGVSRQDGNAELIRSFKKDVLPLIGKKPLRNLTEKDL 163
                     + V+D F E + R+G  +     + +R F+ ++ P IG +P+  ++  +L
Sbjct: 100 ----------RVVTDEFIEKMEREG--KAPATLKKMRWFRDELQPTIGHRPIAEISAHEL 147

Query: 164 LAVLRSVKSRGLNRTVVIRSKDIGQMLRWAEKRKPWRGLMTDGNPADLIDVNKLLDHDYE 223
           L  L+  + +G   + +      G++ R+A        L    NPAD++     L     
Sbjct: 148 LNALKRFERKGHFESAIRARSFSGRVFRYAVAT-----LRAQHNPADIL--RGALITPKV 200

Query: 224 EQRDRLLSPDEIRELRDVLERLENDYDELPAGQKYSGIRPVNTRVQCALWICLSTLCRIG 283
           +    LL P ++ EL             L A   Y G   + TR+  AL +      R G
Sbjct: 201 KHHAALLEPAKVGEL-------------LRAIDGYGG--KIETRI--ALQLAPHVYLRPG 243

Query: 284 ELLKAEWRYVDLEKGTWFIPAEATKGHKGKRQDHHVFLSAFSIAQFKRLQEETGDTPFCF 343
           EL KAEW  +D +   W +PA  TK     R+ H V LS   +   + L+       + F
Sbjct: 244 ELRKAEWGEIDFDAAVWRVPAGRTK----MRKPHAVPLSTQVVTLLRELRAMGNLGSYLF 299

Query: 344 PSKDGRSHVDTKTVSKLIGDRQCRFKNRSKPLAGRHHDDSLVLSKGTKGEWTPHDLRRTG 403
           P+                           KP+     + +L     T+ E T H  R   
Sbjct: 300 PAN----------------------STFLKPICENTLNVALRRLGFTRDEMTSHGFRSIA 337

Query: 404 ATMMQELGV 412
           +T++ E G+
Sbjct: 338 STLLNESGL 346