Pairwise Alignments

Query, 469 a.a., putative phage integrase from Pseudomonas putida KT2440

Subject, 400 a.a., Phage integrase from Sphingobium sp. HT1-2

 Score = 90.1 bits (222), Expect = 1e-22
 Identities = 108/411 (26%), Positives = 168/411 (40%), Gaps = 76/411 (18%)

Query: 46  FKLDGARTRKRLGSWPKKSLAQIRSERDEARVLVTKGLHPTLAAKAARIEAQAAIATTIA 105
           ++ DG      +G +P  +LA+ R +R++AR L+  G  P   AK   IEAQ A   T  
Sbjct: 42  YRFDGKAKTMAMGVFPLITLAEAREKREDARKLLAAGSDP--CAKRKEIEAQEAFEATTG 99

Query: 106 EAEREAAENKTVSDLFDEWI----RDGVSRQDGNAELIRSFKKDVLPLIGKKPLRNLTEK 161
              R  AE         EW+    R+G+   D     I+   +   P +G + +  +T  
Sbjct: 100 F--RIVAE---------EWLAKREREGLG--DITIGKIKWLLEFAYPSLGDRKIGEITSM 146

Query: 162 DLLAVLRSVKSRGLNRTVVIRSKDIGQMLRWAEKRKPWRGLMTDGNPADLIDVNKLLDHD 221
           +LLAVLR V+ RG + T        G++ R+A         +  G            +HD
Sbjct: 147 ELLAVLRQVEGRGRHETARRLRSVCGRVFRYA---------IATGRA----------EHD 187

Query: 222 YEEQ-RDRLLSPDEIRELRDVLERLENDYDELPAGQKYSGIRPVNTRVQCALWICLSTLC 280
                RD L +P +++ L  +    +     L A   + G    +   + AL +      
Sbjct: 188 LSANLRDALTTP-KVKHLAAITSSQQVG-PLLRAIDGFDG----HAVTKAALRLAPHVFV 241

Query: 281 RIGELLKAEWRYVDLEKGTWFIPAEATKGHKGKRQDHHVFLSAFSIAQFKRLQEETGDTP 340
           R GEL  AEW  +D EK  W IPAE  K     R+ H V LS  S+     ++E TG   
Sbjct: 242 RPGELRHAEWPEIDFEKALWSIPAEKMK----MRRPHRVPLSRQSLTILSSIREVTGAGK 297

Query: 341 FCFPSKDGRSHVDTKTVSKLIGDRQCRFKNRSKPLAGRHHDDSLVLSKGTKGEWTPHDLR 400
           F FP                       F++  +P++    + +L     +  E T H  R
Sbjct: 298 FVFPG----------------------FQSLKRPMSENALNGALRRLGYSGDEMTSHGFR 335

Query: 401 RTGATMMQELGV-TLEIIDRCQNHLLGGSKVRRHYLHHDYAKEKT---EAW 447
              +T++ E+G    + I+R   H      VRR Y   +Y +E+    +AW
Sbjct: 336 AMASTLLNEMGKWHPDAIERQLAH-AEADAVRRAYARGEYWEERVVMMQAW 385