Pairwise Alignments

Query, 469 a.a., putative phage integrase from Pseudomonas putida KT2440

Subject, 432 a.a., putative Phage integrase from Pseudomonas putida KT2440

 Score = 64.7 bits (156), Expect = 6e-15
 Identities = 92/406 (22%), Positives = 157/406 (38%), Gaps = 91/406 (22%)

Query: 57  LGSWPKKSLAQIRSERDEARVLVTKGLHPTLAAKAARIEAQAAIATTIAEAEREAAENKT 116
           +  WP+ S+A + +E             P L  +  R  A A + + +A          T
Sbjct: 58  IARWPELSVAAVLAEL------------PALRQRLMRHPATAPVVSGMA----------T 95

Query: 117 VSDLFDEWIRDGVSRQDG-----NAELIRSFKKDVLPLIGKKPLRNLTEKDLLAVLRSVK 171
           V  L D W  D +S          A    +  + V P +G  P++ +T +    + + + 
Sbjct: 96  VGQLLD-WYVDRMSHDRSLSAKRKAATRAAIGQHVRPCLGDLPIKYITAE---LIDKHLI 151

Query: 172 SRGLNRTVVIRSKDIGQMLRWAEKRKPWRGLMTDGNPADLIDVNKLLDHDYEEQRDRLLS 231
             G  +  +   + +  ML  A ++    G M D NP   +  N         +  RL S
Sbjct: 152 WPGQAKLSLSYLRQMFGMLLTAFRQALKLG-MIDSNPMAGVRFNDFTKAKILPKAARLRS 210

Query: 232 PDEIRELRDVLERLENDYDELPAGQKYSGIRPVNTRVQCALWICLSTLCRIGELLKAEWR 291
                +L +++++L   ++  P           N  +   + +   T  RIGE   A W 
Sbjct: 211 V----QLPELMQQLAQAFEAAP-----------NDAMLALMMLAHGT--RIGETRMARWS 253

Query: 292 YVDLEKGTWFIPAEATKGHKGKRQDHHVFLSA---FSIAQFKRLQEETG-DTPFCFPSKD 347
            V L    WFIPA  TK     R +H + L+A     + +++ +Q+  G +  + FP++ 
Sbjct: 254 EVSLAASEWFIPAAHTK----TRTEHRLPLTAQLKALLTRYRGIQQARGYEGVYLFPNRR 309

Query: 348 GRSHVDTKTVSKLIGDRQCRFKNRSKPLAGRHHDDSLVLSKGTKGEWTPHDLRRTGATMM 407
           G    +T+                           S+V ++  +GEWT HDLR+   +  
Sbjct: 310 GHCLSETQA--------------------------SMVFTRLGQGEWTSHDLRKVSRSTW 343

Query: 408 QELGVTLEIIDRCQNHLLGGSKVRRHYLH------HDYAKEKTEAW 447
            +LG+   I +   NH LG  K+   Y+H         A EK  AW
Sbjct: 344 TDLGIDGHIGEMLLNHTLG--KIASTYIHTQAMEQRKLALEKWHAW 387