Pairwise Alignments

Query, 340 a.a., DNA-binding transcriptional repressor from Pseudomonas putida KT2440

Subject, 339 a.a., HTH-type transcriptional repressor PurR from Erwinia tracheiphila SCR3

 Score =  251 bits (640), Expect = 2e-71
 Identities = 147/336 (43%), Positives = 209/336 (62%), Gaps = 4/336 (1%)

Query: 1   MATIKDVAALAGISYTTVSHVLNKTRPVSEQVRLKVEAAIIELDYVPSAVARSLKARSTA 60
           MATIKDVA  AG+S TTVSHV+NKTR V+E+ +  V AAI  L Y PSAVARSLK  +T 
Sbjct: 1   MATIKDVAKHAGVSTTTVSHVINKTRFVAEETKNAVWAAIKALHYSPSAVARSLKVNNTK 60

Query: 61  TIGLLVPNSVNPYFAELARGIEDACERNGYCVILCNSDDNPQKQRSYLRVLLEKRIDGLV 120
           TIGLL  +S  PYFAE+   +E+ C   GY +IL N+ +N QKQ++YL ++ +KR+DGL+
Sbjct: 61  TIGLLATSSEAPYFAEIIEAVENCCFDKGYTLILGNAHNNLQKQQAYLSMMAQKRVDGLL 120

Query: 121 VASVGQDDDLLQSLASVRT-PMVIVD-RELEGVDADLVRIDHEQGAYLATRHLLELGHRD 178
           V      D L+  L   R  PMV++D  E  G   D V  +  +G YLA R+L+E GHRD
Sbjct: 121 VMCSEYPDTLIAMLEDNRNIPMVVMDWGESRGDFTDTVLDNAFEGGYLAGRYLIERGHRD 180

Query: 179 VAYIGGPAETGVTQLRLSGFRRAMAEAGAPVPGSRVLHCDFTSPGGHAAAAQVL-EGKRP 237
           +  I G  E      R +GF +A+AEA  P+    ++  DF    G+ A  ++L + +RP
Sbjct: 181 IGVIPGQMERNTGGGRHAGFLKALAEANIPLRQEWLVQGDFEPESGYQAMQKILSQNERP 240

Query: 238 SAIFAGNDMIGFGVLRAAAERNISVPGELSVIGFDDIELSRYVYPSLTTVGQSIRELGES 297
           +A+F G D++  G + AA E  + VP ++SVIG+D++  +RY  PSLTT+ Q   +LG++
Sbjct: 241 TAVFCGGDVMAMGAICAADEMGLRVPQDISVIGYDNVRNARYFAPSLTTIHQPKEQLGQT 300

Query: 298 AASLLLTRIATPRQGAAEQRIVAPRIVLRESTGPRP 333
           A S+LL RI + R+  ++   V P ++ R S    P
Sbjct: 301 AFSMLLDRITSKRE-ESQTIEVYPSLIERRSVADGP 335