Pairwise Alignments

Query, 340 a.a., DNA-binding transcriptional repressor from Pseudomonas putida KT2440

Subject, 343 a.a., HTH-type transcriptional regulator GalR from Escherichia coli ECRC62

 Score =  189 bits (480), Expect = 9e-53
 Identities = 118/329 (35%), Positives = 175/329 (53%), Gaps = 2/329 (0%)

Query: 1   MATIKDVAALAGISYTTVSHVLNKTRPVSEQVRLKVEAAIIELDYVPSAVARSLKARSTA 60
           MATIKDVA LAG+S  TVS V+N +   SE  RL V +A+  L Y P+A AR+L  ++T 
Sbjct: 1   MATIKDVARLAGVSVATVSRVINNSPKASEASRLAVHSAMESLSYHPNANARALAQQTTE 60

Query: 61  TIGLLVPNSVNPYFAELARGIEDACERNGYCVILCNSDDNPQKQRSYLRVLLEKRIDGLV 120
           T+GL+V +  +P+F  + + +E      G  +++ N   N QK+R  +  L+  R   LV
Sbjct: 61  TVGLIVGDVSDPFFGAMVKAVEQVAYHTGNFLLIGNGYHNEQKERQAIEQLIRHRCAALV 120

Query: 121 VASVGQDDDLLQSLASVRTPMVIVDRELEGVDADLVRIDHEQGAYLATRHLLELGHRDVA 180
           V +    D  L SL      MV+++R L G +   + +D   GA+LATRHL++ GH  + 
Sbjct: 121 VHAKMIPDADLASLMKQMPGMVLINRILPGFENRCIALDDRYGAWLATRHLIQQGHTRIG 180

Query: 181 YIGGPAETGVTQLRLSGFRRAMAEAGAPVPGSRVLHCDFTSPGGHAAAAQVL-EGKRPSA 239
           Y+         + RL G+  A+AE+G       V   +    GG  A  ++L  G+  +A
Sbjct: 181 YLCSNHSISDAEDRLQGYYDALAESGIAANDRLVTFGEPDESGGEQAMTELLGRGRNFTA 240

Query: 240 IFAGNDMIGFGVLRAAAERNISVPGELSVIGFDDIELSRYVYPSLTTVGQSIRELGESAA 299
           +   ND +  G +    +  I VPGE+S+IGFDD+ +SRYV P LTTV   I  +   AA
Sbjct: 241 VACYNDSMAAGAMGVLNDNGIDVPGEISLIGFDDVLVSRYVRPRLTTVRYPIVTMATQAA 300

Query: 300 SLLLTRIATPRQGAAEQRIVAPRIVLRES 328
            L L  +A  R       + +P +V R S
Sbjct: 301 ELALA-LADNRPLPEITNVFSPTLVRRHS 328