Pairwise Alignments

Query, 340 a.a., DNA-binding transcriptional repressor from Pseudomonas putida KT2440

Subject, 336 a.a., LacI family DNA-binding transcriptional regulator from Dickeya dadantii 3937

 Score =  172 bits (435), Expect = 1e-47
 Identities = 107/305 (35%), Positives = 168/305 (55%), Gaps = 2/305 (0%)

Query: 1   MATIKDVAALAGISYTTVSHVLNKTRPVSEQVRLKVEAAIIELDYVPSAVARSLKARSTA 60
           M T+ DVA  AG+S  TVS VLN T  V +  R  V  A+ EL Y P+ +ARSL  RS+ 
Sbjct: 1   MMTMLDVARHAGVSKATVSRVLNGTGQVKQSTRDAVFKAMEELGYRPNFLARSLAQRSSN 60

Query: 61  TIGLLVPNSVNPYFAELARGIEDACERNGYCVILCNSDDNPQKQRSYLRVLLEKRIDGLV 120
           ++GL+V N   PYF  L R   +  E +G  +I+ +  D P+ ++  +++L ++R D +V
Sbjct: 61  SLGLVVSNFDGPYFGRLLRRAAERTETSGKHLIVTDGHDTPEDEQQAVQLLTDRRCDAIV 120

Query: 121 VASVGQDDDLLQSLASVRT-PMVIVDRELEGVDADLVRIDHEQGAYLATRHLLELGHRDV 179
           + +    D  L  L    T P+V+++R L       V  + +Q  +    +L++ GHR++
Sbjct: 121 LYTRHMSDAALMGLLEQSTVPIVVINRHLPMAPDRCVWFEQQQAVFQLIDYLVQQGHREI 180

Query: 180 AYIGGPAETGVTQLRLSGFRRAMAEAGAPVPGSRVLHCDFTSPGGHAAAAQVLEGKRP-S 238
           A I GP  T   + RL+G+R+A+     P    RV++ D   PGG+ A  ++L      S
Sbjct: 181 ACITGPINTPTARARLAGYRQALDHHRIPYDPLRVVNGDNLVPGGYQAVRELLAHDAGFS 240

Query: 239 AIFAGNDMIGFGVLRAAAERNISVPGELSVIGFDDIELSRYVYPSLTTVGQSIRELGESA 298
           AIFA ND +  G ++A  E    +P ++S+ GFDDI  + Y+ P+L+TV   I E+  +A
Sbjct: 241 AIFASNDDMCIGAMKALLEAGKRLPQDVSLFGFDDIPSAPYLNPALSTVYLPIEEMISAA 300

Query: 299 ASLLL 303
            S  L
Sbjct: 301 ISQAL 305