Pairwise Alignments

Query, 340 a.a., DNA-binding transcriptional repressor from Pseudomonas putida KT2440

Subject, 366 a.a., Catabolite control protein A from Azospirillum sp. SherDot2

 Score =  187 bits (474), Expect = 5e-52
 Identities = 118/345 (34%), Positives = 184/345 (53%), Gaps = 15/345 (4%)

Query: 3   TIKDVAALAGISYTTVSHVLNKTRPVSEQVRLKVEAAIIELDYVPSAVARSLKARSTATI 62
           T+ +VA  AG+S +TVS VL  +  V+ + R +V+AA+  L Y+ +  A +L+A  T T+
Sbjct: 19  TLTEVAGHAGVSRSTVSLVLRGSPLVAAETRERVQAAMAALGYIYNRGAANLRAARTQTV 78

Query: 63  GLLVPNSVNPYFAELARGIEDACERNGYCVILCNSDDNPQKQRSYLRVLLEKRIDGLVVA 122
           GLLV    NP++AEL  G++D  +  G+   + N+ + P++Q  +L+ + E  +DG+++ 
Sbjct: 79  GLLVCELNNPFYAELTAGVDDVLDTEGFVAFIANTAEQPERQDRFLQRMREHNVDGVILC 138

Query: 123 -SVGQDDDLLQSLASVRTPMV-----IVDRELEGVDADLVRIDHEQGAYLATRHLLELGH 176
            + G D  LL  L   R P V     + D    G   D   +D++ G      HL+ LGH
Sbjct: 139 PAAGTDSGLLDRLDGWRLPCVQALRFVPDSLESGRGRDYAGVDYQAGIETVIDHLVALGH 198

Query: 177 RDVAYIGGPAETGVTQLRLSGFRRAMAEAGAPVPGSRVLHCDFTSPGGHAAAAQVL-EGK 235
           R +A++GG  +      R +GF  AM   G  +    VL C  T   G   A  +L   +
Sbjct: 199 RRIAFVGGTLDHSAYAGRHAGFTAAMRRHG--LADDLVLRCPLTRRSGAGIADDLLNRPQ 256

Query: 236 RPSAIFAGNDMIGFGVLRAAAERNISVPGELSVIGFDDIELSRYVYPSLTTVGQSIRELG 295
            P+A    ND++  G++     R +    +L+V GFDD+  +    P+LTTV  S R++G
Sbjct: 257 TPTAALCYNDVVALGLMLGLEARGLRAGRDLAVTGFDDVPEAALSRPALTTVATSARQIG 316

Query: 296 ESAASLLLTRIATPRQGAAEQRIVAPRIVLRESTG-----PRPDL 335
           + AA LLL RIA P QG  E+ I+  R+V+R+S G     P P L
Sbjct: 317 QEAARLLLRRIADP-QGPPERIILPSRLVVRQSCGSPGAAPSPSL 360