Pairwise Alignments

Query, 331 a.a., D-ribose ABC transporter - permease subunit from Pseudomonas putida KT2440

Subject, 340 a.a., Inositol transport system permease protein (from data) from Pseudomonas simiae WCS417

 Score =  173 bits (439), Expect = 5e-48
 Identities = 107/284 (37%), Positives = 159/284 (55%), Gaps = 17/284 (5%)

Query: 59  QIPDLMVLAVGMTFVLIIGGIDLSVGSVLALAASTVS--VAILGWGWGVLPS-------- 108
           Q+  + +LA+G+T V+I  GIDLS GSVLAL+A   +       +   V PS        
Sbjct: 62  QVSIIGLLAIGVTQVIITTGIDLSSGSVLALSAMIAASLAQTSDFSRAVFPSLTDLPVWI 121

Query: 109 -ALLGMAVAALAGSITGGVTVAWRIPSFIVSLGVLEMARGLAYQFTDSR-TAYIGDAYAW 166
              +G+ V  LAG+I G +     IP FI +LG++  ARGLA  +T+ +  + + D+Y  
Sbjct: 122 PVAMGLGVGLLAGAINGSIIAVTGIPPFIATLGMMVSARGLARYYTEGQPVSMLSDSYT- 180

Query: 167 FSNPVAFGVSPAFIIALLVIVLAQLVLTRTVFGRYLIGIGTNEEAVRLAGIDPRPYKVLV 226
               +  G  P  II L+V V+  + L  T +G+Y   IG N +A R +GI+ + + ++V
Sbjct: 181 ---AIGHGAMPV-IIFLVVAVIFHIALRYTKYGKYTYAIGGNMQAARTSGINVKRHLIIV 236

Query: 227 FALMGLLAGLAALFQISRLEAADPNAGSGLELQVIAAVVIGGTSLMGGRGSVISTFFGVL 286
           +++ GLLAGLA +   +R        G   EL  IAA VIGGTSL GG G +  T  G L
Sbjct: 237 YSIAGLLAGLAGVVASARAATGQAGMGMSYELDAIAAAVIGGTSLAGGVGRITGTVIGAL 296

Query: 287 IISVLAAGLAQIGASEPTKRIITGAVIVIAVVLDTYRSRRAGRR 330
           I+ V+A+G   +G     + II G +IV+AVV+D YR++R  +R
Sbjct: 297 ILGVMASGFTFVGVDAYIQDIIKGLIIVVAVVIDQYRNKRKLKR 340