Pairwise Alignments

Query, 331 a.a., D-ribose ABC transporter - permease subunit from Pseudomonas putida KT2440

Subject, 321 a.a., ribose ABC transporter permease from Escherichia coli ECRC62

 Score =  194 bits (492), Expect = 3e-54
 Identities = 110/294 (37%), Positives = 170/294 (57%), Gaps = 6/294 (2%)

Query: 32  ALLAMIVLFSFLSSHFWSYGTFSTLANQIPDLMVLAVGMTFVLIIGGIDLSVGSVLALAA 91
           ALL +I + S LS +F++      +  Q     ++AVGMT V++  GIDLSVGS+LAL  
Sbjct: 25  ALLVLIAIVSTLSPNFFTINNLFNILQQTSVNAIMAVGMTLVILTSGIDLSVGSLLALTG 84

Query: 92  STVSVAILGWGWGVLPSALLGMAVAALAGSITGGVTVAWRIPSFIVSLGVLEMARGLAYQ 151
           + V+ +I+G     L +    +A+ A  G++TG +    R+ +FI +L ++ + RG+   
Sbjct: 85  A-VAASIVGIEVNALVAVAAALALGAAIGAVTGVIVAKGRVQAFIATLVMMLLLRGVTMV 143

Query: 152 FTDSRTAYIG-----DAYAWFSNPVAFGVSPAFIIALLVIVLAQLVLTRTVFGRYLIGIG 206
           +T+      G     D + WF      GV     I  +V + A  +L  T  GRY+  +G
Sbjct: 144 YTNGSPVNTGFTENADLFGWFGIGRPLGVPTPVWIMGIVFLAAWYMLHHTRLGRYIYALG 203

Query: 207 TNEEAVRLAGIDPRPYKVLVFALMGLLAGLAALFQISRLEAADPNAGSGLELQVIAAVVI 266
            NE A RL+GI+    K++V++L GLLA LA + +++RL +A P AG+G EL  IAAVV+
Sbjct: 204 GNEAATRLSGINVNKIKIIVYSLCGLLASLAGIIEVARLSSAQPTAGTGYELDAIAAVVL 263

Query: 267 GGTSLMGGRGSVISTFFGVLIISVLAAGLAQIGASEPTKRIITGAVIVIAVVLD 320
           GGTSL GG+G ++ T  G LI+  L  GL  +G S   + I+   VI++AV++D
Sbjct: 264 GGTSLAGGKGRIVGTLIGALILGFLNNGLNLLGVSSYYQMIVKAVVILLAVLVD 317