Pairwise Alignments

Query, 331 a.a., D-ribose ABC transporter - permease subunit from Pseudomonas putida KT2440

Subject, 355 a.a., ABC transporter permease from Dickeya dianthicola ME23

 Score =  164 bits (416), Expect = 2e-45
 Identities = 105/311 (33%), Positives = 160/311 (51%), Gaps = 17/311 (5%)

Query: 32  ALLAMIVLFSFLSSHFWSYGTFSTLANQIPDLMVLAVGMTFVLIIGGIDLSVGSVLAL-- 89
           ALL ++  FS +  +F +      +   +    +LA+GMT V++ GGIDLSVG+V  +  
Sbjct: 19  ALLLVVAFFSLMVPNFLTASNLLIMTQHVAITGLLAIGMTLVILTGGIDLSVGAVAGICG 78

Query: 90  --AASTVSVAILGWGWGVL----PSALLGMAVAA-LAGSITGGVTVAWRIPSFIVSLGVL 142
             A + ++  I  WG   L    P  +L ++V   L G + G V     +  FI +LG++
Sbjct: 79  MVAGALLTNGIPLWGGNTLFLNVPEVILVVSVLGMLIGLVNGVVITRLVVAPFICTLGMM 138

Query: 143 EMARGLAYQFTDSRT--------AYIGDAYAWFSNPVAFGVSPAFIIALLVIVLAQLVLT 194
            +ARG+A  F D  T        A     +A+  +    G+     + L  ++L   +  
Sbjct: 139 YVARGVALLFNDGGTYANLNGMPALGNTGFAFLGSGTLLGIYLPIWLMLAFLLLGLYLTR 198

Query: 195 RTVFGRYLIGIGTNEEAVRLAGIDPRPYKVLVFALMGLLAGLAALFQISRLEAADPNAGS 254
           +T  GRY+  IG NE A RLAG+     K+ V+A  GL A L  L   S+L+ A P  G+
Sbjct: 199 KTPLGRYIYAIGGNESAARLAGVPIVNVKIFVYAFSGLCAALVGLVVASQLQTAHPMTGN 258

Query: 255 GLELQVIAAVVIGGTSLMGGRGSVISTFFGVLIISVLAAGLAQIGASEPTKRIITGAVIV 314
             E+  I A V+GGT+L GGRG V  +  G  +I  LA G+  +G S+  + +I G VIV
Sbjct: 259 MFEMDAIGATVLGGTALAGGRGRVSGSIIGAFVIVFLADGMVMMGVSDFWQMVIKGLVIV 318

Query: 315 IAVVLDTYRSR 325
            AVV+D ++ R
Sbjct: 319 TAVVIDQFQQR 329