Pairwise Alignments

Query, 331 a.a., D-ribose ABC transporter - permease subunit from Pseudomonas putida KT2440

Subject, 344 a.a., ABC transporter permease from Dickeya dadantii 3937

 Score =  186 bits (472), Expect = 7e-52
 Identities = 117/310 (37%), Positives = 173/310 (55%), Gaps = 16/310 (5%)

Query: 33  LLAMIVLFSFLSSHFWSYGTFSTLANQIPDLMVLAVGMTFVLIIGGIDLSVGSVLALAAS 92
           ++ +++ F   +S+F +    + +  ++    ++AVGMTFV++  GIDLSVGS+LA+ A 
Sbjct: 35  MILLLIFFQSQNSNFLTERNITNILTEVSIYGIMAVGMTFVILTAGIDLSVGSILAVCAM 94

Query: 93  TVSVAILG--------WGWGVLPSALLGMAVAALAGSITG-----GVTVAWRIPSFIVSL 139
           T +  I G          WG + S L+G+ +    G++ G     GVT   R+  FIV+L
Sbjct: 95  TAAYVIKGDNFTTVDAQAWGGM-SWLVGLGICLAMGTVIGFLHGLGVT-RLRLSPFIVTL 152

Query: 140 GVLEMARGLAYQFTDSRT-AYIGDAYAWFSNPVAFGVSPAFIIALLVIVLAQLVLTRTVF 198
           G + + RGL     D    A     Y W+      GVS    I  LV ++  L L +T +
Sbjct: 153 GGMTIWRGLTLVINDGAPIAGFDPGYRWWGRGELLGVSIPIWIFALVALIGWLALHKTRW 212

Query: 199 GRYLIGIGTNEEAVRLAGIDPRPYKVLVFALMGLLAGLAALFQISRLEAADPNAGSGLEL 258
           GR++  IG N EA RLAG++ +   V V+ ++G LAGLA     +RL +A+  AG   EL
Sbjct: 213 GRFVYAIGGNTEAARLAGVNVQRVLVSVYVVIGALAGLAGFILSARLGSAEAVAGISFEL 272

Query: 259 QVIAAVVIGGTSLMGGRGSVISTFFGVLIISVLAAGLAQIGASEPTKRIITGAVIVIAVV 318
           +VIA+VVIGGTSLMGG G +  T  G +I+ +L  GL  +  S   ++IITG +IV+AV 
Sbjct: 273 RVIASVVIGGTSLMGGYGRISGTIIGSIIMGILINGLVLMNVSAYYQQIITGLIIVLAVA 332

Query: 319 LDTYRSRRAG 328
            DTY   R G
Sbjct: 333 FDTYAKSRRG 342