Pairwise Alignments

Query, 331 a.a., D-ribose ABC transporter - permease subunit from Pseudomonas putida KT2440

Subject, 318 a.a., Ribose/xylose/arabinose/galactoside ABC-type transport systems, permease components from Echinicola vietnamensis KMM 6221, DSM 17526

 Score =  181 bits (458), Expect = 3e-50
 Identities = 108/305 (35%), Positives = 170/305 (55%), Gaps = 11/305 (3%)

Query: 32  ALLAMIVLFSFLSSHFWSYGTFSTLANQIPDLMVLAVGMTFVLIIGGIDLSVGSVLALAA 91
           AL+ + ++ S LS  F +      +  Q+   + ++VGMT V++  GIDLSVGS+LAL  
Sbjct: 12  ALIILCLVLSLLSDRFLTLANGWNVMRQVSVNICISVGMTLVILTAGIDLSVGSILALCG 71

Query: 92  STVSVAI----------LGWGWGVLPSALLGMAVAALAGSITGGVTVAWRIPSFIVSLGV 141
           +  +  I          L  G+  L + +LG+ +    G   G     +++P F+ +L +
Sbjct: 72  AVTASLIKNGIAVEGLNLHIGFAPLGAVILGVGLGFGLGWFNGWTITRFKVPPFVATLAM 131

Query: 142 LEMARGLAYQFTDSRTAY-IGDAYAWFSNPVAFGVSPAFIIALLVIVLAQLVLTRTVFGR 200
           L +ARGL   +T       +G+ +A+       G+     I  +++ LA L+  +T FGR
Sbjct: 132 LTIARGLTMLWTGGFPINGLGEDFAFLGTGWFLGIPMPVWITAVIVALAVLLTKKTKFGR 191

Query: 201 YLIGIGTNEEAVRLAGIDPRPYKVLVFALMGLLAGLAALFQISRLEAADPNAGSGLELQV 260
           Y+  IG NE A RL+GI+    K+ V+A+ G LA +  +   SRL++A PNAG   EL  
Sbjct: 192 YVYAIGGNERAARLSGINISRVKMTVYAIAGGLAAVGGMIVTSRLDSAQPNAGISYELDA 251

Query: 261 IAAVVIGGTSLMGGRGSVISTFFGVLIISVLAAGLAQIGASEPTKRIITGAVIVIAVVLD 320
           IAAVVIGGTSL GG+G+++    G +II VL  GL  +  S   ++++ GAVI++AVV+D
Sbjct: 252 IAAVVIGGTSLSGGKGTIMGAVLGGIIIGVLNNGLVLLNVSPFWQQVVKGAVILLAVVID 311

Query: 321 TYRSR 325
              S+
Sbjct: 312 KANSK 316