Pairwise Alignments

Query, 331 a.a., D-ribose ABC transporter - permease subunit from Pseudomonas putida KT2440

Subject, 334 a.a., sugar ABC transporter permease from Agrobacterium fabrum C58

 Score =  171 bits (433), Expect = 2e-47
 Identities = 104/298 (34%), Positives = 168/298 (56%), Gaps = 5/298 (1%)

Query: 27  LGLAGALLAMIVLFSFLSSHFWSYGTFSTLANQIPDLMVLAVGMTFVLIIGGIDLSVGSV 86
           L +A      +V FS  +  F + G    +  Q   +++++V MTFV+I GGIDLSVGS+
Sbjct: 24  LSIAAFFALCMVFFSVTTDTFLTAGNLLNVVRQAAPILIVSVAMTFVIITGGIDLSVGSM 83

Query: 87  LALAASTVSVAIL-GWGWGVLPSALLGMAVAALAGSITGGVTVAWRIPSFIVSLGVLEMA 145
           +AL  +  ++ +  G+ W ++  A+L   +    G + G       IP+FIV+L  L + 
Sbjct: 84  VALINAVGAILLAAGYPWPLVVVAML--VLGGGLGLVQGWFIAYQGIPAFIVTLAGLSIL 141

Query: 146 RGLAYQFTDSRTAYIGDAYAWF--SNPVAFGVSPAFIIALLVIVLAQLVLTRTVFGRYLI 203
           RG+A   T   +  I DA  +F        G+    +I ++V V+A +VL+ T +GR ++
Sbjct: 142 RGVALYITQGYSVPIPDAPGFFYLGRGDFLGMPVPALIGVVVTVIAYIVLSSTRYGRRVV 201

Query: 204 GIGTNEEAVRLAGIDPRPYKVLVFALMGLLAGLAALFQISRLEAADPNAGSGLELQVIAA 263
            +G+N EA R  G+  +     V+   G+ + +A L   +RL +   NA  G ELQV+AA
Sbjct: 202 AVGSNPEAARRVGMPAKWILASVYLAAGVASAIAGLMIAARLGSGSSNAAVGFELQVVAA 261

Query: 264 VVIGGTSLMGGRGSVISTFFGVLIISVLAAGLAQIGASEPTKRIITGAVIVIAVVLDT 321
           VV+GGTSLMGGRG+++ T  G + I+V+  GL  +  S    +I+TGA+I+ A+ L+T
Sbjct: 262 VVLGGTSLMGGRGTILGTVLGTMTIAVIGNGLILMHISPFFTQIVTGAIILAAIWLNT 319