Pairwise Alignments

Query, 524 a.a., ribose ABC transporter - ATP-binding subunit from Pseudomonas putida KT2440

Subject, 542 a.a., Ribose ABC transporter, ATP-binding protein RbsA (TC 3.A.1.2.1) from Variovorax sp. SCN45

 Score =  555 bits (1429), Expect = e-162
 Identities = 298/512 (58%), Positives = 365/512 (71%), Gaps = 10/512 (1%)

Query: 16  VLAASGLGKTYAQPVLGEVSLSLRAGEVLALTGENGAGKSTLSKLISGLEVPTTGHMTYR 75
           VL+ S +GK YA PVL +VSL L AGEVLALTGENGAGKSTLSK++ GL  PT G M   
Sbjct: 9   VLSLSTMGKDYAAPVLDDVSLVLNAGEVLALTGENGAGKSTLSKIVCGLVQPTRGQMLLD 68

Query: 76  GQAYAPGSRGEAERLGVRMVMQELNLLPTLTVAENLFLDNLPSRFGWISHKRLRQLATAA 135
           GQ +APGSR +AERLGVRMVMQEL L+ TL+VAENL LD LPS+ GWI   +L +LA   
Sbjct: 69  GQPFAPGSRRDAERLGVRMVMQELGLVTTLSVAENLLLDRLPSKTGWIRRGKLNELAARQ 128

Query: 136 MARVGLDAIDPDTPVGELGIGHQQMVEIARNLIGDCHVLILDEPTAMLTAREVALLFTQI 195
           +A++G+  IDP TPV  LGIG QQMVEIARNL  D  VL+LDEPTAMLT RE + LF QI
Sbjct: 129 LAKIGMQNIDPATPVARLGIGQQQMVEIARNLQDDTRVLVLDEPTAMLTPRETSHLFEQI 188

Query: 196 ERLRARGVAIVYISHRLEELQRVAQRIVVLRDGKLVCDEPIQRYSSAELVNLMVGRELGE 255
           E L+ARGVAIVY+SHRLEELQR+A R+ VLRDG+LV    +     +ELV  MVGR + E
Sbjct: 189 ELLKARGVAIVYVSHRLEELQRIADRVAVLRDGRLVDVRAMAGVRESELVQRMVGRAVHE 248

Query: 256 HIDLGRRQLGAPLLKVDKLCRGDKVREVSFEVRAGEIFGISGLIGAGRTELLRLIYGADR 315
           H    RR  G  LL    + R   VR+V  ++RAGE+ G++GL+G+GRTEL+RL++GADR
Sbjct: 249 HEGRERRTAGPVLLSARGIGRAQVVRDVDIDLRAGEVMGLAGLVGSGRTELVRLLFGADR 308

Query: 316 ADSGGIALGQPPQAV-----SIDSPKAAVRAGIALITEDRKGEGLLLTQSISANIALGNL 370
           AD G I L +  Q V        SP  A+RAGI L+TEDRK +GLLLTQSI  N  L +L
Sbjct: 309 ADRGEITLYENDQPVQQARKGWRSPMQAIRAGIGLVTEDRKSQGLLLTQSIRVNATLSDL 368

Query: 371 GAVSRAGVLDSEAEKALAERQIQAMRIRSAGAQQVVGELSGGNQQKVVIGRWLERDCQVL 430
           GA+SRAG L    E+ +A++ ++ +RIRS   +Q V  LSGGNQQKVV  RWL R+C+VL
Sbjct: 369 GAISRAGWLQRAKERGIAQKLVELLRIRSRSIEQPVATLSGGNQQKVVFARWLHRECKVL 428

Query: 431 LFDEPTRGIDVGAKFDIYGLLAELARQGKALVVVSSDLRELMLICDRIAVLSAGRLIDTF 490
           L DEPTRG+DVGA+ D+Y  L  +   GKAL++VSSDLRELM +CDRI V+SAGRL+  F
Sbjct: 429 LLDEPTRGVDVGARADLYAELDRMTDAGKALLMVSSDLRELMAMCDRIGVMSAGRLVAVF 488

Query: 491 ARDHWSQDQLLAAAFAGYQKRDALLHDAAPRM 522
            R  W++  LLAAAF+     DA    AAP +
Sbjct: 489 ERGEWTEQSLLAAAFS-----DATGRAAAPTL 515