Pairwise Alignments

Query, 524 a.a., ribose ABC transporter - ATP-binding subunit from Pseudomonas putida KT2440

Subject, 507 a.a., L-arabinose ABC transporter ATP-binding protein AraG from Dickeya dianthicola ME23

 Score =  344 bits (883), Expect = 4e-99
 Identities = 197/491 (40%), Positives = 298/491 (60%), Gaps = 6/491 (1%)

Query: 17  LAASGLGKTY-AQPVLGEVSLSLRAGEVLALTGENGAGKSTLSKLISGLEVPTTGHMTYR 75
           L+  G+GK +     L ++S    AG++ AL GENGAGKSTL K++SG  +P+ G +  +
Sbjct: 8   LSFRGIGKAFPGVKALDDISFDCHAGQIHALMGENGAGKSTLLKILSGNYLPSQGEIDIK 67

Query: 76  GQAYAPGSRGEAERLGVRMVMQELNLLPTLTVAENLFLDNLPSRFGWISHKRLRQLATAA 135
           GQ     +  +A   GV ++ QEL+L+P ++VAEN++L  LP + G ++   LR  A   
Sbjct: 68  GQPVRFANTTDALNAGVAIIYQELHLVPEMSVAENIYLGQLPHKGGLVNRSLLRYEARLQ 127

Query: 136 MARVGLDAIDPDTPVGELGIGHQQMVEIARNLIGDCHVLILDEPTAMLTAREVALLFTQI 195
           +  +GLD IDPDTP+  L IG  QMVEIA+ L  +  ++  DEPT+ L+ARE+  LF  I
Sbjct: 128 LEHLGLD-IDPDTPLKYLSIGQWQMVEIAKALARNAKIIAFDEPTSSLSAREIEQLFRVI 186

Query: 196 ERLRARGVAIVYISHRLEELQRVAQRIVVLRDGKLVCD-EPIQRYSSAELVNLMVGRELG 254
             LR  G  I+Y+SHR+EE+  ++  I V +DG+ V     +Q+    +LV  MVGR LG
Sbjct: 187 RELRNEGRVILYVSHRMEEIFALSDAITVFKDGRYVKTFADMQQVDHEQLVQAMVGRNLG 246

Query: 255 EHIDLGRRQLGAPLLKVDKLCRGDKVREVSFEVRAGEIFGISGLIGAGRTELLRLIYGAD 314
           +      R  G P L++ ++        +S  VR+GEI G+ GL+GAGR+EL++ ++GA 
Sbjct: 247 DIYGYQPRPHGDPRLELHEVKAVGVKSPISLSVRSGEIVGLFGLVGAGRSELMKALFGAT 306

Query: 315 RADSGGIALGQPPQAVSIDSPKAAVRAGIALITEDRKGEGLLLTQSISANIALGNLGAVS 374
               G + L    Q +   SP  A+R G+ L  EDRK +G++   S+  NI +       
Sbjct: 307 GITRGEVRLDG--QLLLARSPGDAIRRGLMLCPEDRKADGIIPVHSVRDNINISARRKHI 364

Query: 375 RAGVLDSEA-EKALAERQIQAMRIRSAGAQQVVGELSGGNQQKVVIGRWLERDCQVLLFD 433
           ++G + +EA E+  A+R IQA+ I++    Q++  LSGGNQQK ++GRWL  + +V++ D
Sbjct: 365 KSGFIINEAWEEENADRHIQALNIKTPSPAQLIMNLSGGNQQKAILGRWLSEEMKVIMLD 424

Query: 434 EPTRGIDVGAKFDIYGLLAELARQGKALVVVSSDLRELMLICDRIAVLSAGRLIDTFARD 493
           EPTRGIDVGAK +IY ++ ELARQG A++  SSDL E++ + DRI V+  G +      D
Sbjct: 425 EPTRGIDVGAKHEIYHVIYELARQGIAVLFASSDLPEVLGLADRIVVMREGAISGELLHD 484

Query: 494 HWSQDQLLAAA 504
             S+ ++L+ A
Sbjct: 485 EASEQKVLSLA 495



 Score = 87.0 bits (214), Expect = 1e-21
 Identities = 66/243 (27%), Positives = 116/243 (47%), Gaps = 10/243 (4%)

Query: 282 EVSFEVRAGEIFGISGLIGAGRTELLRLIYGADRADSGGIAL-GQPPQAVSIDSPKAAVR 340
           ++SF+  AG+I  + G  GAG++ LL+++ G      G I + GQP   V   +   A+ 
Sbjct: 25  DISFDCHAGQIHALMGENGAGKSTLLKILSGNYLPSQGEIDIKGQP---VRFANTTDALN 81

Query: 341 AGIALITEDRKGEGLLLTQSISANIALGNLGAVSRAGVLDSEAEKALAERQIQAMRIRSA 400
           AG+A+I ++     L+   S++ NI LG L    + G+++    +  A  Q++ + +   
Sbjct: 82  AGVAIIYQELH---LVPEMSVAENIYLGQLP--HKGGLVNRSLLRYEARLQLEHLGL-DI 135

Query: 401 GAQQVVGELSGGNQQKVVIGRWLERDCQVLLFDEPTRGIDVGAKFDIYGLLAELARQGKA 460
                +  LS G  Q V I + L R+ +++ FDEPT  +       ++ ++ EL  +G+ 
Sbjct: 136 DPDTPLKYLSIGQWQMVEIAKALARNAKIIAFDEPTSSLSAREIEQLFRVIRELRNEGRV 195

Query: 461 LVVVSSDLRELMLICDRIAVLSAGRLIDTFARDHWSQDQLLAAAFAGYQKRDALLHDAAP 520
           ++ VS  + E+  + D I V   GR + TFA       + L  A  G    D   +   P
Sbjct: 196 ILYVSHRMEEIFALSDAITVFKDGRYVKTFADMQQVDHEQLVQAMVGRNLGDIYGYQPRP 255

Query: 521 RMD 523
             D
Sbjct: 256 HGD 258