Pairwise Alignments

Query, 524 a.a., ribose ABC transporter - ATP-binding subunit from Pseudomonas putida KT2440

Subject, 505 a.a., ABC transporter, nucleotide binding/ATPase protein (ribose) from Agrobacterium fabrum C58

 Score =  374 bits (961), Expect = e-108
 Identities = 216/504 (42%), Positives = 309/504 (61%), Gaps = 7/504 (1%)

Query: 8   MPALANEVVLAASGLGKTY-AQPVLGEVSLSLRAGEVLALTGENGAGKSTLSKLISGLEV 66
           M      V+L    + K +     L  V   LR+GEV A+ GENGAGKSTL K+ISG+  
Sbjct: 1   MARAERSVLLRLENISKEFPGVKALSNVHFDLRSGEVHAVCGENGAGKSTLMKIISGVYQ 60

Query: 67  PTTGHMTYRGQAYAPGSRGEAERLGVRMVMQELNLLPTLTVAENLFLDNLPSRFGWISHK 126
           P+ G + ++G+     S  ++E  G+ ++ QELNL+P L+VAEN++L   P R   +  K
Sbjct: 61  PSEGTILHKGEKVQYASPLQSEAAGIAIIHQELNLVPHLSVAENIYLAREPRRGFLVDRK 120

Query: 127 RLRQLATAAMARVGLDAIDPDTPVGELGIGHQQMVEIARNLIGDCHVLILDEPTAMLTAR 186
           +LR  A   + R+G+D I+PD  V  L +   QMVEIA+ L  D  VLI+DEPT+ LT +
Sbjct: 121 KLRLDAKRCLDRLGVD-INPDQLVRSLSVAQCQMVEIAKALSLDAEVLIMDEPTSSLTEQ 179

Query: 187 EVALLFTQIERLRARGVAIVYISHRLEELQRVAQRIVVLRDGKLVCDEPIQRYSSAELVN 246
           E  LLF  I  L+A GV IVYISHRL+E+  +  R+ +LRDG+ +  +     +  ++V 
Sbjct: 180 ETRLLFKVIRDLKASGVGIVYISHRLDEMAEIVDRVTILRDGRYISTDDFASITVDDIVT 239

Query: 247 LMVGRELGEHI-DLGRRQLGAPLLKVDKLCRGDKVREVSFEVRAGEIFGISGLIGAGRTE 305
            MVGR L +   +   R     L  V+ L R     +VSF +R GEI G +GL+GAGRTE
Sbjct: 240 RMVGRSLEDKFPERTSRPTDDILFSVEGLTRNGVFSDVSFSLRRGEILGFAGLMGAGRTE 299

Query: 306 LLRLIYGADRADSGGIALGQPPQAVSIDSPKAAVRAGIALITEDRKGEGLLLTQSISANI 365
           + R I+GAD  D+G I      + +SI SP+ A+  GIA ++EDRK +GL +  S++AN 
Sbjct: 300 VARAIFGADPLDAGKIVFNG--RELSIGSPQDAIEEGIAYLSEDRKSDGLAIKMSVAANT 357

Query: 366 ALGNLGAVS-RAGVLDSEAEKALAERQIQAMRIRSAGAQQVVGELSGGNQQKVVIGRWLE 424
            L NLG VS R G++D +    +A+R +  + IR+    Q V  LSGGNQQK++IG+WL 
Sbjct: 358 TLANLGEVSNRFGLIDFKKHDDVAKRYVDLLNIRTPSIDQTVRLLSGGNQQKIIIGKWLF 417

Query: 425 RDCQVLLFDEPTRGIDVGAKFDIYGLLAELARQGKALVVVSSDLRELMLICDRIAVLSAG 484
           R  +VL FDEPTRGIDVGAKF IY ++ ELA QG  ++++SS+L E++ + DRIAV   G
Sbjct: 418 RQSRVLFFDEPTRGIDVGAKFAIYKIMDELAAQGIGVILISSELPEILGLTDRIAVFHQG 477

Query: 485 RLIDTFARDHWSQDQLLAAAFAGY 508
           R+         +Q++++  A +GY
Sbjct: 478 RITGVLETAKTNQEEIMRYA-SGY 500