Pairwise Alignments

Query, 297 a.a., Transcriptional regulator, LysR family from Pseudomonas putida KT2440

Subject, 300 a.a., transcriptional activator NhaR from Pseudomonas fluorescens SBW25

 Score =  479 bits (1234), Expect = e-140
 Identities = 245/296 (82%), Positives = 262/296 (88%), Gaps = 1/296 (0%)

Query: 1   MLNYRQLHYFWAVAKTGSITRASQQLNLTPQTISGQITLFEQTYGLELFQRAGRQLELTE 60
           MLNYRQLHYFW VAKTGSI RA +QLNLTPQTISGQI+L EQT+G+ LFQR GRQLELTE
Sbjct: 1   MLNYRQLHYFWVVAKTGSIVRACEQLNLTPQTISGQISLLEQTFGIALFQRVGRQLELTE 60

Query: 61  TGRQALVYAEQMFQIGSELEAMLRAGPQEQ-ILFRVGVADVVPKSIVYRLLAPTMDLEEV 119
            GR+AL YAEQMFQ G+ELEA+LRA P EQ ILFRVGVADVVPKSIVYRL+APTM+L E 
Sbjct: 61  AGRRALPYAEQMFQTGNELEALLRAQPDEQQILFRVGVADVVPKSIVYRLIAPTMELSEP 120

Query: 120 LRINCREDKLERLLADLAIQRLDLVISDSPMPNHLDIKCYSQKLGECGLSFFATPALAQR 179
           +RI CREDKLERLLADLAIQRLDLVISDSPMP HLDIK YSQKLGECG+SFFAT ALA  
Sbjct: 121 IRITCREDKLERLLADLAIQRLDLVISDSPMPTHLDIKGYSQKLGECGISFFATQALADA 180

Query: 180 LEGPFPACLQDAPLLVPGQETVVRSRLLRWLGEQQVQPRIVGEFDDSALMQAFGQSGSGI 239
             G FP CL  APLL+PG ETVVRSRL RW  EQQ+QP+I+GEFDDSALMQAFGQSGSGI
Sbjct: 181 YGGDFPQCLHGAPLLIPGAETVVRSRLQRWFAEQQIQPKIIGEFDDSALMQAFGQSGSGI 240

Query: 240 FVAPSVIAEEVCRQYGVQLIGQTEAVHESFYAISVERKVKHPGIVAITEGARRELF 295
           F+APSVIA+EV RQYGV LIGQT AV ESFYAISVERKVKHPGIVAITEGARRELF
Sbjct: 241 FIAPSVIADEVVRQYGVALIGQTVAVTESFYAISVERKVKHPGIVAITEGARRELF 296