Pairwise Alignments

Query, 297 a.a., Transcriptional regulator, LysR family from Pseudomonas putida KT2440

Subject, 299 a.a., transcriptional activator NhaR from Serratia liquefaciens MT49

 Score =  210 bits (535), Expect = 3e-59
 Identities = 109/283 (38%), Positives = 170/283 (60%), Gaps = 4/283 (1%)

Query: 2   LNYRQLHYFWAVAKTGSITRASQQLNLTPQTISGQITLFEQTYGLELFQRAGRQLELTET 61
           +N+  L+YFW V K GS+  A++ L LTPQTI+GQI   E+    +LF+R GR L  +E 
Sbjct: 6   INFNHLYYFWQVCKEGSVVGAAEALFLTPQTITGQIKALEERLDGKLFKRQGRGLVPSEL 65

Query: 62  GRQALVYAEQMFQIGSELEAMLRAGPQEQILFRVGVADVVPKSIVYRLLAPTMDLE-EVL 120
           G+    YA++MF +  E+  ++    +  +LF VGVAD + K +V ++L   + ++ E +
Sbjct: 66  GQLVFRYADKMFMLSQEMLDIVNYRKESNLLFDVGVADALSKRLVSQVLETAVVVDNEQI 125

Query: 121 RINCREDKLERLLADLAIQRLDLVISDSPMPNHLDIKCYSQKLGECGLSFFATPALAQRL 180
            + C E   E LL  L+  +LD+++SD P+ +      +S KLGECG+SFF         
Sbjct: 126 HLRCFESTHEMLLEQLSQHKLDMILSDCPVDSSQQEGLFSLKLGECGISFFCRQPAPDL- 184

Query: 181 EGPFPACLQDAPLLVPGQETVVRSRLLRWLGEQQVQPRIVGEFDDSALMQAFGQSGSGIF 240
             PFPACL+   LL+PG+ +++  +LL W   Q +Q  I+GEFDD+ALM+ FG   + IF
Sbjct: 185 --PFPACLEQRKLLIPGRRSMLGRKLLNWFNTQGIQVEILGEFDDAALMKTFGMYHNAIF 242

Query: 241 VAPSVIAEEVCRQYGVQLIGQTEAVHESFYAISVERKVKHPGI 283
           VAP++ A++      V  IG+ ++V E +Y I  ER ++HP +
Sbjct: 243 VAPTLYAQDTYNDDDVVEIGRIDSVQEEYYIIFAERMIQHPAV 285