Pairwise Alignments

Query, 308 a.a., Transcriptional regulator, LysR family from Pseudomonas putida KT2440

Subject, 303 a.a., PCP degradation transcriptional activation protein from Xanthobacter sp. DMC5

 Score =  158 bits (399), Expect = 2e-43
 Identities = 98/296 (33%), Positives = 151/296 (51%), Gaps = 4/296 (1%)

Query: 1   MNLSKVDLNLFIVFDAIYTEANLTRAGQIVGITQPAVSNALSRLRETFNDPLFVRTAQGM 60
           M+ S++DLNL +  +A+  E N+TRA   + ++QPAVS  L+RLR+ F+DPL V   +GM
Sbjct: 1   MDTSRLDLNLLVTLEALLAERNVTRAAARLHLSQPAVSAQLARLRDLFDDPLLVPARRGM 60

Query: 61  VPTPMAQNIIGPVRNALALLRTSVQESRTFNPQQANKTFRISMTDLTEAVILPPLFQRLR 120
            PT  A  + GP+R AL  LR ++ E+R F+P  A+ T  I+ +D  +A ++ PL   LR
Sbjct: 61  TPTVKAVELAGPLRAALDQLRATL-EARDFDPATADLTVTIACSDYIQAAVVMPLVVALR 119

Query: 121 RLAPAVMIESFLCKRRETTKELAAGRLDFAIDAPLNTDPQVRHIKLMQDRYVCALRQGHP 180
             AP V +           ++LA+G  D  +  P  T   +R   L  + YV   R+GHP
Sbjct: 120 ARAPGVRVAVRHLMPDLIEQQLASGETDLVLTTPRPTQAHLRTQHLFAETYVLIGRRGHP 179

Query: 181 LADSKLTLDSYLGMTHIHIS-SRRNGLGYVDLALGKMGVQRKVALRSQHYLMASQVLQQT 239
                L+++ Y  + H+ +S S       VD  L  +G +R V + +  +L   +++  +
Sbjct: 180 RLRRGLSIEDYAELEHVIVSPSGGQFRTPVDEGLAALGHRRSVVMSAASFLFIPEIVAAS 239

Query: 240 DMAMTVPERFARRHQLRYQ--ALPVEVPALETHLYWHESTDQDPANRWMREQITEL 293
           D+   VP R  R    R     LP      +  L WHE T      RW+R  I E+
Sbjct: 240 DVVALVPRRLLRDPPARLVMIELPWLAEGFDVDLLWHERTHGHAGQRWLRALIAEV 295