Pairwise Alignments

Query, 308 a.a., Transcriptional regulator, LysR family from Pseudomonas putida KT2440

Subject, 304 a.a., LysR family transcriptional regulator from Pseudomonas simiae WCS417

 Score =  144 bits (363), Expect = 3e-39
 Identities = 101/304 (33%), Positives = 151/304 (49%), Gaps = 29/304 (9%)

Query: 2   NLSKVDLNLFIVFDAIYTEANLTRAGQIVGITQPAVSNALSRLRETFNDPLFVRTAQGMV 61
           +L +VDLNL IVF+ +  E ++TRA + + + QPA+S ALSRLR  F+DPLFVRT + M 
Sbjct: 5   DLRRVDLNLLIVFETLMHERSVTRAAEKLFLGQPAISAALSRLRGLFDDPLFVRTGRSME 64

Query: 62  PTPMAQNIIGPVRNALALLRTSVQESRTFNPQQANKTFRISMTDLTEAVILPPLFQRLRR 121
           P+  A  I   +  AL  + T+V  +  F+P  +   FRI ++D  E  +LP L +RLR 
Sbjct: 65  PSARAVEIFALLSPALDSISTAVSRAAEFDPATSTAVFRIGLSDDVEFALLPQLLKRLRA 124

Query: 122 LAPAVM-----IESFLCKRRETTKELAAGRLDFAIDAPLNTDPQVRHIKLMQDRYVCALR 176
            AP ++     +   L      + E++ G + +  D P N   +V             LR
Sbjct: 125 EAPGIVLVVRRVNYILMPGLLASGEISIG-VSYTADLPANAKRKV-------------LR 170

Query: 177 QGHP---LADS---KLTLDSYLGMTHIHISSRRNGLGYVDLALGKMGVQRKVALRSQHYL 230
           +  P    ADS    L+LD +    H  +S   +  G++D  L K+  +R V L    + 
Sbjct: 171 RSLPKLLRADSVPGSLSLDDFCARPHALVSFAGDLSGFIDEELEKLDRKRHVVLAVPQFN 230

Query: 231 MASQVLQQTDMAMTVP----ERFARRHQLRYQALPVEVPALETHLYWHESTDQDPANRWM 286
               +L  TD+  TVP    E       LR +  P+ V + E H+ W  S D DP  RW+
Sbjct: 231 GLGTLLAGTDILATVPDYAAEALTSAGGLRAEDPPLPVRSFELHMAWRGSQDNDPGERWL 290

Query: 287 REQI 290
           R +I
Sbjct: 291 RSRI 294