Pairwise Alignments

Query, 308 a.a., Transcriptional regulator, LysR family from Pseudomonas putida KT2440

Subject, 326 a.a., Transcriptional regulator, LysR family from Variovorax sp. SCN45

 Score =  150 bits (378), Expect = 5e-41
 Identities = 96/295 (32%), Positives = 146/295 (49%), Gaps = 6/295 (2%)

Query: 5   KVDLNLFIVFDAIYTEANLTRAGQIVGITQPAVSNALSRLRETFNDPLFVRTAQGMVPTP 64
           K+DL+L  V   + T+ +++RA   +G+ QPAVS AL RLRE   DPL VR+  GMVPT 
Sbjct: 9   KIDLHLIRVLHTVLTDRSVSRAAIRLGMYQPAVSAALKRLRELSGDPLLVRSGSGMVPTD 68

Query: 65  MAQNIIGPVRNALALLRTSVQESRTFNPQQANKTFRISMTDLTEAVILPPLFQRLRRLAP 124
               +I P  + L        ++R F+PQ A  TFRI+ +D  + + LP L  +++R AP
Sbjct: 69  AGLRMIEPAASILRAAEMLFSDARGFDPQSAATTFRIAASDYMDPLFLPMLVAQVKRDAP 128

Query: 125 AVMIE-SFLCKRRETTKELAAGRLDFAIDAPLNTDPQVRHIKLMQDRYVCALRQGHPLAD 183
              IE   L    +    LA G++D  I   L     +   +L  D  V  + + HP   
Sbjct: 129 LCQIEIHALSPDSDYHGHLALGQVDLVIGNWLKPPEDLHMARLFGDEVVSLVNKDHPAVR 188

Query: 184 SKLTLDSYLGMTHIHISSRR-NGLGYVDLALGKMGVQRKVALRSQHYLMASQVLQQTDMA 242
               L+++L   HI  +     G G +D  L ++G QR +  R  H+ +   ++  + + 
Sbjct: 189 RGWDLETWLAAEHIAPTPMHPGGRGIIDQMLDELGRQRNITARCAHFGLIPDMVASSLLV 248

Query: 243 MTVP----ERFARRHQLRYQALPVEVPALETHLYWHESTDQDPANRWMREQITEL 293
           +T      ERFA R  L     PV +P L  +  WHE T    + RW+RE I ++
Sbjct: 249 LTTGRQYCERFAARLPLAILECPVALPRLMYYQLWHERTHSSSSARWLRECIKDV 303