Pairwise Alignments

Query, 308 a.a., Transcriptional regulator, LysR family from Pseudomonas putida KT2440

Subject, 320 a.a., Transcriptional regulator, LysR family from Pseudomonas putida KT2440

 Score =  165 bits (417), Expect = 1e-45
 Identities = 90/299 (30%), Positives = 152/299 (50%), Gaps = 5/299 (1%)

Query: 1   MNLSKVDLNLFIVFDAIYTEANLTRAGQIVGITQPAVSNALSRLRETFNDPLFVRTAQGM 60
           M++ ++DLNL ++ D +Y E NL+ A + +G++QP  S +L RLRE F D LF+ T +GM
Sbjct: 1   MDIRRLDLNLLLLLDELYREQNLSAAARRLGMSQPMASASLRRLREYFEDQLFLSTGRGM 60

Query: 61  VPTPMAQNIIGPVRNALALLRTSVQESRTFNPQQANKTFRISMTDLTEAVILPPLFQRLR 120
            PTP   +I   V   L  ++  +     F P+Q+++ F IS +D+   + +PP+ +RL 
Sbjct: 61  RPTPFTVSIAASVSGVLERIKHEILAKPAFQPRQSDRLFTISTSDIGALIFVPPILRRLG 120

Query: 121 RLAPAVMIESFLCKRRETTKELAAGRLDFAID-APLNTDPQVRHIKLMQDRYVCALRQGH 179
             AP   +       ++  + L  G +D A+   P     QV+   L +  + C +R+ H
Sbjct: 121 EDAPNTDLRCVSLPHQQLEQALEQGSVDLAVGYFPDLQGEQVKTQALFEHNFTCIVRRNH 180

Query: 180 PLADSKLTLDSYLGMTHIHISSRRNGLGYVDLALGKMGVQRKVALRSQHYLMASQVLQQT 239
           P     L+L+ +L   H+ ++         +  L ++ +QR+V L   H++   Q++  T
Sbjct: 181 PSIGDTLSLEQFLAADHLVVNQEGRSQEIFEQRLRELKLQRRVHLEVPHFMSVPQLIAST 240

Query: 240 DMAMTVPERFA---RRHQLRYQALPVEVPALETHLYWHESTDQDPANRWMREQI-TELC 294
           +M  TVP          Q++    P+EV   E  L+WH   + DPA  W R  +  ELC
Sbjct: 241 NMVATVPLSLGVWFASEQIKMLTPPIEVEKFELKLHWHRQMEDDPAVSWFRNAVFEELC 299