Pairwise Alignments

Query, 276 a.a., Transcriptional regulator, AraC family from Pseudomonas putida KT2440

Subject, 297 a.a., AraC family transcriptional regulator from Pseudomonas simiae WCS417

 Score =  106 bits (264), Expect = 7e-28
 Identities = 73/252 (28%), Positives = 122/252 (48%), Gaps = 18/252 (7%)

Query: 27  YDPHWHDSFLVGVTEQGVQQFNCRRVRHRSTPGQVFLLEPGDIHDGLAPTEEGFTYSTLY 86
           Y  H H+ F +GV   G   ++        + G V L+ PGD+H       E ++Y  +Y
Sbjct: 37  YSRHAHEHFSIGVVTTGRSYYHYGAETFEISAGTVVLMNPGDVHACNPIANEPWSYQMVY 96

Query: 87  LEPAWL-DQQLRALYEHAPGD---SLPSFADTLCHDERLARATALAFRAVHDQDLRIVRQ 142
           ++  WL D Q +  +    G    + P   DT+ ++  L     L    V +Q   + +Q
Sbjct: 97  IDTPWLTDLQHQLGFSTEQGYRPFNTPYTRDTVLYEGLLELYGIL----VDEQAEHLQKQ 152

Query: 143 TAMDDLLACLTRHLHWRRRINPDP----RLPLTAQRARDFLHANLERDIGLEDLAQACGI 198
           +++      ++     ++R+NP       +    +RA D++  +    + LED+  A  +
Sbjct: 153 SSL------VSYFTEVQQRLNPSDTPVREVNHKLERAADYIREHCTDALRLEDICVAAEL 206

Query: 199 DRFRLTRAFKAAFGIAPHAYLIQLRLARARRLLAQGQTPAEVAVALGFADQSHLGRWFRR 258
               L RAFK  +G+ PHA+L+  R+  AR  L QG+  A+VA+A GFADQ+H  R F++
Sbjct: 207 SPSYLIRAFKQYYGLTPHAFLVNQRIQFARAQLRQGELIADVALAAGFADQAHFQRTFKQ 266

Query: 259 AYQLTPADYRRR 270
            +  TP  YR R
Sbjct: 267 HFAATPGQYRDR 278