Pairwise Alignments

Query, 276 a.a., Transcriptional regulator, AraC family from Pseudomonas putida KT2440

Subject, 263 a.a., transcriptional regulator from Pseudomonas simiae WCS417

 Score =  102 bits (253), Expect = 1e-26
 Identities = 81/253 (32%), Positives = 118/253 (46%), Gaps = 21/253 (8%)

Query: 24  GHAYDPHWHDSFLVGVTEQGVQQFNCRRVRHRSTPGQVFLLEPGDIHDGLAPTEEGFTYS 83
           G  +  H HD  ++GV   G ++    R    + PG + L  PG I  G A     + + 
Sbjct: 21  GLTFARHSHDECVIGVNLLGEEKVWLDRREFDAGPGSITLYNPGQIQGGGAAEGAPWHFV 80

Query: 84  TLYLEPAWLDQQLRALYEHAPGDSLPSFADTLCHDERLARATALAFRAVHDQDLRIVRQT 143
           +LY   A  DQ    L     G +   F  +LC    LA+  A A +     D  +VR+ 
Sbjct: 81  SLY---ATADQLAADL-----GLAHLEFDRSLCFQPDLAQRLAAAIKGALSTDT-LVREL 131

Query: 144 AMDDLLACLTRHLHWRRRINPDPRLPLTAQ-------RARDFLHANLERDIGLEDLAQAC 196
             + L+  L + ++         RLP +A        RA++ L A L + + L+ L    
Sbjct: 132 NEEALVLLLGQVVN-----TSGVRLPGSANTGKPLINRAQELLAAQLHQPLTLDHLGVEL 186

Query: 197 GIDRFRLTRAFKAAFGIAPHAYLIQLRLARARRLLAQGQTPAEVAVALGFADQSHLGRWF 256
           G+ +F L RAF+   G+ P  + +QLR  RA+ LL  G   +  A  LGFADQSHL R F
Sbjct: 187 GLSKFHLLRAFQKETGLTPREWAMQLRTRRAKGLLRNGVPASAAAHTLGFADQSHLNRHF 246

Query: 257 RRAYQLTPADYRR 269
           R AY +TP  Y+R
Sbjct: 247 RAAYGITPGVYQR 259