Pairwise Alignments

Query, 276 a.a., Transcriptional regulator, AraC family from Pseudomonas putida KT2440

Subject, 283 a.a., Transcriptional regulator, AraC family from Variovorax sp. SCN45

 Score = 93.6 bits (231), Expect = 4e-24
 Identities = 72/256 (28%), Positives = 111/256 (43%), Gaps = 23/256 (8%)

Query: 27  YDPHWHDSFLVGVTEQGVQQFNCRRVRHRSTPGQVFLLEPGDIHDGLAPTEEGFTYSTLY 86
           Y  HWH ++ VG+ + G Q     R +  +  G +    PG++HDG         +  +Y
Sbjct: 31  YGRHWHATYGVGLLDHGAQSSASGRGKVDAYAGDLITTNPGEVHDGRPLGGPSRRWRMVY 90

Query: 87  LEPAWLDQQLRALYEHAPGDSLPSFADTLCHDERLARATALAFRAVHDQDLRIVRQTAMD 146
            + A     +  +     G         +  D RL+ A    F  + +       + A  
Sbjct: 91  FDAA----VMAGMRGDDTGGHDVELTRPVLRDSRLSGALRSLFVRLDEWQALHASRAATA 146

Query: 147 DLLAC---------LTRHLHWR----RRINPDPRLPLTAQRARDFLHANLERDIGLEDLA 193
           + LAC         L    H      R    D R      R R+ L  +L     LE LA
Sbjct: 147 EALACEESLAEVCGLLLEAHSTALSLRETGGDVR------RLRERLADDLLDAPSLEQLA 200

Query: 194 QACGIDRFRLTRAFKAAFGIAPHAYLIQLRLARARRLLAQGQTPAEVAVALGFADQSHLG 253
              G+ +F++ R F+ A+G+ PHA+L+  R  RAR L+ +G++ A  A A GFADQSH+ 
Sbjct: 201 AMAGLSKFQVLRRFEKAYGVPPHAWLLLQRGERARALIRRGESLAGAAAASGFADQSHMT 260

Query: 254 RWFRRAYQLTPADYRR 269
           R F R +  TP  ++R
Sbjct: 261 RVFTRHFGFTPGAWQR 276