Pairwise Alignments

Query, 276 a.a., Transcriptional regulator, AraC family from Pseudomonas putida KT2440

Subject, 274 a.a., Transcriptional regulator, AraC family from Pseudomonas putida KT2440

 Score =  144 bits (363), Expect = 2e-39
 Identities = 93/274 (33%), Positives = 135/274 (49%), Gaps = 20/274 (7%)

Query: 2   SNWIDFKQDADTGIESVRAHFVGHAYDPHWHDSFLVGVTEQGVQQFNCRRVRHRSTPGQV 61
           S+W+  +     GIE + A F  H YDPH HD++ +G T  GVQ F+ +       PG  
Sbjct: 11  SDWV-IRSAQPGGIERIEAWFGSHGYDPHRHDTYSIGRTLAGVQSFHYKGSLRHGIPGNT 69

Query: 62  FLLEPGDIHDGLAPTEEGFTYSTLYLEPAWLDQQLRALYEHAPGDSLPSFADTLCHDERL 121
            +L P ++HDG+A T+ GF Y   Y++PA +   L        G  LP  A  L  D RL
Sbjct: 70  LVLHPDELHDGMAGTDAGFRYRMAYVDPALIQNVL-------GGQPLPFIAGGLSSDPRL 122

Query: 122 ARATALAFRAVHDQDLRIVRQTAMDDLLACLTRHLHWRRRINPDPRLP-----LTAQRAR 176
             A+    +AV      +  Q A+ DL   L       R +   PR         A+RAR
Sbjct: 123 YHASEAFVQAVDHALEPLEEQDALYDLAIAL-------RAVGGKPRGRKRLDYQAAERAR 175

Query: 177 DFLHANLERDIGLEDLAQACGIDRFRLTRAFKAAFGIAPHAYLIQLRLARARRLLAQGQT 236
            F+  +L   I L+ L QA G +R+ L+R F+  +G +P+ ++   RL   RR++  G T
Sbjct: 176 AFIMEHLHVGITLDMLEQASGRERWSLSRDFRTLYGTSPYRFVTLRRLDCLRRMILDGFT 235

Query: 237 PAEVAVALGFADQSHLGRWFRRAYQLTPADYRRR 270
             + A+A GF DQSH+ R F R Y + P  +  R
Sbjct: 236 LVDAALAAGFHDQSHMTRHFTRCYGVPPLRWLER 269