Pairwise Alignments

Query, 408 a.a., Probable sugar efflux transporter from Pseudomonas putida KT2440

Subject, 393 a.a., chloramphenicol resistance protein from Agrobacterium fabrum C58

 Score =  167 bits (422), Expect = 7e-46
 Identities = 116/386 (30%), Positives = 198/386 (51%), Gaps = 10/386 (2%)

Query: 28  LSVIALALAAFIFNTTEFVPVALLSDIGRSFDMSTAQVGLMLTIYAWIVALASLPMMLLT 87
           L++ AL +AA+   TTEFV V LL  +     ++    GL++++YA  V   +  +  LT
Sbjct: 3   LAIFALTIAAYAIGTTEFVIVGLLPTVANDLHITLPLAGLIVSVYALGVTFGAPILTALT 62

Query: 88  RNIERRRLLLFVFLVFIVSHLLSWLSQSFAMLLVSRIGIALAHAVFWSITASLAVRVAPP 147
             IER+ LLL +  +FIV +  + LS S+ MLLV+R+  A AH VF+S+ A++A  + P 
Sbjct: 63  GRIERKPLLLGLMALFIVGNTAAALSPSYEMLLVARVIAAFAHGVFFSVGATIAADLVPE 122

Query: 148 GQQAKALGLLATGTTLAMVLGIPLGRVVGEALGWRITFLSIAGVALATMLCLIKSLP-LL 206
            ++A A+ ++  G T+A+V G+P+G  +G+  GWR TF ++  + +   + +   LP  L
Sbjct: 123 NRRASAIAMMFMGLTVAIVTGVPIGTYIGQIFGWRATFWAVGALGIVAFVAIAVLLPNTL 182

Query: 207 PSQNSGSLRSLPVLFKRPALVITYLLVTLVITAQFTAYSYIEPFALHVAQIGGDRTTLLL 266
                 S+     +     L+I + +  L     F A++++ P    V        +L+L
Sbjct: 183 KKAPPASIFDQVRVLGSGRLLIVFAMTALGYGGTFVAFTFLAPILQDVTGFSESSVSLIL 242

Query: 267 LLFGGAGVFGSLLFSRYSERFPHGFLVGSIGVLAACLLLMLPLSGNFYVFAVLSMFWGVA 326
           +L+G A   G++   + +   P   L+G +  L A +L++   +    V  ++++   + 
Sbjct: 243 VLYGIAIAAGNIGGGKIANHNPVKALIG-LFALQAIVLVIFSFTAVSPVLTLITLV-ALG 300

Query: 327 ILSFS--LALQSKTLKLASD----ATDVAMALFSGIYNIGIGGGALLGS-IVSSQMDVAD 379
            LSF+    LQ   ++LA +    A DVA AL    +N+GI  GA LG  +V S M +  
Sbjct: 301 FLSFANVPGLQLYVVQLAKEHRPGAVDVASALNIAAFNLGIALGAWLGGVVVESPMGLGA 360

Query: 380 IGLVGGSVAVVGLVLAVASTRRFREA 405
              VG  +  V L+L + S    R A
Sbjct: 361 TPWVGAILVAVALLLTIWSGALDRRA 386