Pairwise Alignments

Query, 301 a.a., putative transcriptional regulator, AraC family from Pseudomonas putida KT2440

Subject, 309 a.a., AraC family transcriptional regulator from Pseudomonas simiae WCS417

 Score =  156 bits (395), Expect = 5e-43
 Identities = 95/245 (38%), Positives = 131/245 (53%), Gaps = 3/245 (1%)

Query: 47  PQIYEPSLMIVAQGSKLARLGPRTLEYGAGHYLVQALSVPFMCETF-ATREAPLLGVAVG 105
           P + EP+L I+A GSK  RL      Y   +YLV ++++P       AT E P L V + 
Sbjct: 56  PVLVEPALCILASGSKEVRLADEIFAYDPLNYLVFSVAMPVAGRIIDATPEDPNLSVRIN 115

Query: 106 IDRGVLGELVQSMGLAPDAEVQAQTPQSMTSAALDAPMRESVERLLHCLQDPLDAKVLGP 165
           ID   L  L+   G  P       T + M    +D  + ++V RL   L  P D  +L P
Sbjct: 116 IDPAQLTALIAEAG--PMGVPSRPTSRGMYVDRIDNQLLDAVLRLARLLDTPKDIAMLAP 173

Query: 166 ARVREVLYTALRGPQAGVLRALVEQQGHFARIGAALAHLREHYAEPLSVEALAARANMSV 225
              RE+LY  LRGPQ   L  +        R+  A+  L  +Y +PL ++ LA   N+SV
Sbjct: 174 LINREILYRLLRGPQGYRLYEIAVANSQSHRVSQAITWLNGNYEQPLRIDDLAKAVNLSV 233

Query: 226 STFHEHFKRCTDMAPMQYLKRLRLLKAQQMLIGEGLGVAQAAHRVGYQSTSQFSREYKRQ 285
           ST H  FK  T M+P+QY K+LRL +A++++I EGL  + A +RVGY+S SQFSREY R 
Sbjct: 234 STLHHRFKAITAMSPLQYQKQLRLQEARRLMIAEGLEASAAGYRVGYESPSQFSREYSRL 293

Query: 286 FERSP 290
           F   P
Sbjct: 294 FGAPP 298