Pairwise Alignments

Query, 301 a.a., putative transcriptional regulator, AraC family from Pseudomonas putida KT2440

Subject, 297 a.a., AraC family transcriptional regulator from Pseudomonas simiae WCS417

 Score =  395 bits (1015), Expect = e-115
 Identities = 205/294 (69%), Positives = 235/294 (79%), Gaps = 1/294 (0%)

Query: 1   MQLTRHVDANAPLCSLIRSLTTRPGFVPTLLPQVQVLSWDHYVASSPQIYEPSLMIVAQG 60
           M LTRH+DANA L +LI  LT   GF PT LP VQVL     VA  PQIYEPSLM VAQG
Sbjct: 1   MLLTRHLDANATLVALIEGLTPCDGFSPTNLPGVQVLRASCDVARGPQIYEPSLMFVAQG 60

Query: 61  SKLARLGPRTLEYGAGHYLVQALSVPFMCETFATR-EAPLLGVAVGIDRGVLGELVQSMG 119
           SK+A LGPRTLEYGAGHYL+QA+ VPF CETFA   +APLLGV VGIDR VLGELV +MG
Sbjct: 61  SKVAYLGPRTLEYGAGHYLIQAMPVPFECETFAMAPDAPLLGVTVGIDRVVLGELVMAMG 120

Query: 120 LAPDAEVQAQTPQSMTSAALDAPMRESVERLLHCLQDPLDAKVLGPARVREVLYTALRGP 179
           +       AQT +SM+S  LD  MR  VERLL CL DPL+++++GPARVRE+L+TALRGP
Sbjct: 121 IQAGPPPTAQTLESMSSVVLDDAMRGCVERLLQCLHDPLESRIMGPARVRELLFTALRGP 180

Query: 180 QAGVLRALVEQQGHFARIGAALAHLREHYAEPLSVEALAARANMSVSTFHEHFKRCTDMA 239
           QA VLRALVEQQG F+RI  +L HL  HYAEPL++E LA  A+MS STFHEHFKRCT ++
Sbjct: 181 QADVLRALVEQQGQFSRIATSLNHLHAHYAEPLNIETLAGYAHMSASTFHEHFKRCTLLS 240

Query: 240 PMQYLKRLRLLKAQQMLIGEGLGVAQAAHRVGYQSTSQFSREYKRQFERSPGDE 293
           P+QYLKRLRLLKAQQ+L+ EG+GVAQAAH VGYQSTSQFSREYKR FER+PG+E
Sbjct: 241 PVQYLKRLRLLKAQQLLLVEGMGVAQAAHSVGYQSTSQFSREYKRYFERNPGEE 294