Pairwise Alignments

Query, 301 a.a., putative transcriptional regulator, AraC family from Pseudomonas putida KT2440

Subject, 347 a.a., Transcriptional regulator, AraC family from Variovorax sp. SCN45

 Score =  160 bits (406), Expect = 3e-44
 Identities = 102/285 (35%), Positives = 149/285 (52%), Gaps = 4/285 (1%)

Query: 8   DANAPLCSLIRSLTT-RPGFVPTLLPQVQVLSWDHYVASSPQIYEPSLMIVAQGSKLARL 66
           DA   L SL++ +   + G V T +P + V               P+L ++AQGSK   +
Sbjct: 41  DARKELVSLLKHIMGGQDGTVITAVPGLHVFCISKPEGPKHAFASPALGLIAQGSKRIIV 100

Query: 67  GPRTLEYGAGHYLVQALSVPFMCET-FATREAPLLGVAVGIDRGVLGELVQSMGLAPDAE 125
           G     Y   HYLV ++ +P   +   A+   P LG+ + +    +GEL++   L   A 
Sbjct: 101 GDDIYVYDPMHYLVTSVDLPVCGQVRVASNNEPYLGLRLELALDDIGELIRDDKLPAKAN 160

Query: 126 VQAQTPQSMTSAALDAPMRESVERLLHCLQDPLDAKVLGPARVREVLYTALRGPQAGVLR 185
             A     +   A+  P+ E V RLL  L  P D  ++ P   RE++Y  L   +   LR
Sbjct: 161 APASRGMYVNRIAM--PVLEPVLRLLRLLDTPEDVPIMAPLIKREIMYRLLVNGEGARLR 218

Query: 186 ALVEQQGHFARIGAALAHLREHYAEPLSVEALAARANMSVSTFHEHFKRCTDMAPMQYLK 245
            +  Q  H  RI  A++ LR +YA+ L VE +A   +MSVS+FH HFK  T M+P+QY K
Sbjct: 219 QIALQDSHTQRIAKAISALRVNYAQSLRVEDMARAVHMSVSSFHHHFKAVTAMSPLQYQK 278

Query: 246 RLRLLKAQQMLIGEGLGVAQAAHRVGYQSTSQFSREYKRQFERSP 290
           +LRL +A++ ++  G  VA AAH VGY+S SQF+REY R F   P
Sbjct: 279 QLRLQEARRQMLIAGADVASAAHNVGYESPSQFAREYGRMFGAPP 323