Pairwise Alignments

Query, 301 a.a., putative transcriptional regulator, AraC family from Pseudomonas putida KT2440

Subject, 320 a.a., AraC family transcriptional regulator from Variovorax sp. OAS795

 Score =  155 bits (391), Expect = 2e-42
 Identities = 107/296 (36%), Positives = 150/296 (50%), Gaps = 14/296 (4%)

Query: 5   RHVDANAP-------LCSLIRSLTTRPGFVPTLLPQVQVLSWDHYVASSPQIYEPSLMIV 57
           RH DA A        +  +I + T   G   T +P +     D     +  +  PS+++V
Sbjct: 4   RHTDAAAQCRQLQEAMAQIIGARTPGAGDFETPIPGLGFFRRDAPAPPAACMVAPSIVLV 63

Query: 58  AQGSKLARLGPRTLEYGAGHYLVQALSVPFMCET-FATREAPLLGVAVGIDRGVLGELVQ 116
           AQG+K   +G     Y    +LV +L++P   E   A+ + P LG+ + +D  VL EL+ 
Sbjct: 64  AQGAKQMWVGGEAYPYDTSQFLVTSLNLPANSEVRLASAQQPCLGLLLKLDVRVLAELIA 123

Query: 117 SMGLAPDAEVQAQTPQSMTSA--ALDAPMRESVERLLHCLQDPLDAKVLGPARVREVLYT 174
              L    +        + +A  AL AP    + RLL  L +P    VL P   RE+ Y 
Sbjct: 124 QGNLPSQRDRPGGAGVGIGTATPALLAP----IARLLALLDEPEAIPVLAPMICREIHYR 179

Query: 175 ALRGPQAGVLRALVEQQGHFARIGAALAHLREHYAEPLSVEALAARANMSVSTFHEHFKR 234
            L   QAG LR +    G   RI  A+  L  +YA PL V+ LA R  MS  TFH HF++
Sbjct: 180 LLASDQAGKLRQIASVDGQGHRIARAIDWLTLNYALPLRVDELALRVRMSTPTFHHHFRQ 239

Query: 235 CTDMAPMQYLKRLRLLKAQQMLIGEGLGVAQAAHRVGYQSTSQFSREYKRQFERSP 290
            T M+P+QY K LRL +A+++++ E L  A AA RVGY+S SQFSREY R F   P
Sbjct: 240 LTAMSPLQYQKWLRLNEAKRLMLAEHLDAASAAFRVGYESPSQFSREYSRLFGAPP 295