Pairwise Alignments

Query, 301 a.a., putative transcriptional regulator, AraC family from Pseudomonas putida KT2440

Subject, 306 a.a., Transcriptional regulator, AraC family from Pseudomonas putida KT2440

 Score =  159 bits (401), Expect = 1e-43
 Identities = 95/279 (34%), Positives = 147/279 (52%), Gaps = 3/279 (1%)

Query: 13  LCSLIRSLTTRPGFVPTLLPQVQVLSWDHYVASSPQIYEPSLMIVAQGSKLARLGPRTLE 72
           L  LI      P    + +  + ++ +   V S P + +P+L I+AQGSK   LG     
Sbjct: 18  LAELINRHAGEPFGPASAIDDLYLVRYTENVRSVPTLAQPALCILAQGSKSLFLGDEQYA 77

Query: 73  YGAGHYLVQALSVPFMCETF-ATREAPLLGVAVGIDRGVLGELVQSMGLAPDAEVQAQTP 131
           Y   HY+V ++++P       A+ E P LG+ + +D   + +L+   G  P       + 
Sbjct: 78  YDPLHYMVVSVTLPLSAVRLDASPENPSLGLRMDLDPAEISQLIAESG--PMLVPNRPSG 135

Query: 132 QSMTSAALDAPMRESVERLLHCLQDPLDAKVLGPARVREVLYTALRGPQAGVLRALVEQQ 191
           + +     DA + +++ RLL  L  P D  +L P   RE+LY  LRGPQ   L  +    
Sbjct: 136 RGLYVERTDAALLDALLRLLRLLDTPRDIAMLAPLFRREILYRLLRGPQGYRLYEIALAN 195

Query: 192 GHFARIGAALAHLREHYAEPLSVEALAARANMSVSTFHEHFKRCTDMAPMQYLKRLRLLK 251
               R+  A+  L  ++ +PL +E LA   N+S ST H  FK  T M+P+QY K+LRL +
Sbjct: 196 SQTHRVCQAITWLNNNFQQPLRIEDLAREVNLSTSTLHHRFKAVTSMSPLQYQKQLRLQE 255

Query: 252 AQQMLIGEGLGVAQAAHRVGYQSTSQFSREYKRQFERSP 290
           A+++++ +GL  A AA+RVGY+S SQFSREY R +   P
Sbjct: 256 ARRLMLNDGLEAAVAAYRVGYESPSQFSREYSRLYGAPP 294