Pairwise Alignments

Query, 301 a.a., putative transcriptional regulator, AraC family from Pseudomonas putida KT2440

Subject, 318 a.a., putative ARAC-type regulatory protein (VIMSS) from Escherichia coli BW25113

 Score =  215 bits (547), Expect = 1e-60
 Identities = 119/282 (42%), Positives = 166/282 (58%), Gaps = 3/282 (1%)

Query: 13  LCSLIRSLTTRPGFVPTLLPQVQVLSWDHYVASSPQIYEPSLMIVAQGSKLARLGPRTLE 72
           L   +  L  +   +  LLP V++L  +   A +P +YEP ++I+  G K+  +  R   
Sbjct: 29  LADKVNKLKNKENSLSGLLPDVRLLYGETPFARTPVMYEPGIIILFSGHKIGYINERVFR 88

Query: 73  YGAGHYLVQALSVPFMCETFATREAPLLGVAVGIDRGVLGELVQSMGLAPDAEVQAQTPQ 132
           Y A  YL+  + +PF CET+AT E PL G+ + +D   L EL+  +G   D   Q     
Sbjct: 89  YDANEYLLLTVPLPFECETYATSEVPLAGLRLNVDILQLQELLMDIG--EDEHFQPSMAA 146

Query: 133 S-MTSAALDAPMRESVERLLHCLQDPLDAKVLGPARVREVLYTALRGPQAGVLRALVEQQ 191
           S + SA L   +  + ERLL  ++ PLDA++LG   +RE+LY  L GP  G L ALV +Q
Sbjct: 147 SGINSATLSEEILCAAERLLDVMERPLDARILGKQIIREILYYVLTGPCGGALLALVSRQ 206

Query: 192 GHFARIGAALAHLREHYAEPLSVEALAARANMSVSTFHEHFKRCTDMAPMQYLKRLRLLK 251
            HF+ I   L  +   Y E LSVE LAA ANMSVS FH +FK  T  +P+QYLK  RL K
Sbjct: 207 THFSLISRVLKRIENKYTENLSVEQLAAEANMSVSAFHHNFKSVTSTSPLQYLKNYRLHK 266

Query: 252 AQQMLIGEGLGVAQAAHRVGYQSTSQFSREYKRQFERSPGDE 293
           A+ M+I +G+  + AA RVGY+S SQFSRE+KR F  +PG++
Sbjct: 267 ARMMIIHDGMKASAAAMRVGYESASQFSREFKRYFGVTPGED 308